Gene Shel_25720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25720 
Symbol 
ID8396460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2844349 
End bp2845074 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content60% 
IMG OID644987317 
ProductABC-type cobalt transport system, permease component CbiQ 
Protein accessionYP_003144928 
Protein GI257065256 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTACT TCCAGTACAC AAACGAGAAC TACAGGAGCG CGCTCGATCC GCGCACGAAG 
CTTGCCATGC TGATCGCCAT CAACGTGGTG GTCATGGGCA CGGGGTTCGA CGGAATCGAC
TATGTGCTGC GGGTCGCGTG CGCCCTTGTC CCGCTGGTGT GCTTCTTCAT CATCCGCAAG
CCGAAAGCTG CGCTGGTATA CGGCGTAATC TGCGTGGCCA TGCTGCTTAC CGAGAAGCTC
GTGATTCCCA ACACCCAAGG GGTGCTGAAC CTGGTGATCG TGTTCACCAC GGGTGCGTTC
TCGCGCTTTT TGGCGGGCAT GGCCTTCGCG TATTACGTGT TCGCGTCGAC CACGGTGAGC
GAGTTCGTGA CCGCCATGAA GCGTATGCAC ATGCCCGACC AGATCACCAT TCCCCTGTCG
GTCATGTTCC GTTTCTTCCC CACGCTGGGT GAAGAAAGCA AGGCCATCAG CAACGCCATG
CGCATGCGCG GCATCGGCCT GGGCGGAACC AAGGGCGGCG TGCTTTCGCA CCTCGAATAC
GTGATCGTGC CCCTGATGAT GTCGACGCTG CGCATCGGCG ACGAGCTGTC GGCGGCGTCG
CTCACGAAGG GGCTGGATGT GGGCTGCCCG CGCACCCACA TCTGCAACGT GCGGTTCGGC
GCGCTGGATT GGTTTTTGGT GGCGGCAAGC ATTGCGATGC TCGGATACAT GCTGGTCATA
CGATGA
 
Protein sequence
MQYFQYTNEN YRSALDPRTK LAMLIAINVV VMGTGFDGID YVLRVACALV PLVCFFIIRK 
PKAALVYGVI CVAMLLTEKL VIPNTQGVLN LVIVFTTGAF SRFLAGMAFA YYVFASTTVS
EFVTAMKRMH MPDQITIPLS VMFRFFPTLG EESKAISNAM RMRGIGLGGT KGGVLSHLEY
VIVPLMMSTL RIGDELSAAS LTKGLDVGCP RTHICNVRFG ALDWFLVAAS IAMLGYMLVI
R