Gene Shel_25040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25040 
Symbol 
ID8396392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2772056 
End bp2772964 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content64% 
IMG OID644987249 
Productprotein of unknown function (DUF1814) 
Protein accessionYP_003144860 
Protein GI257065188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTATT CGTCTCCGAA AGCCTTGGAG ATGGCTGTGA AGGACGCGGC CAAGGCTTCC 
CCTCTCGACA CTAATCGCGC CATCGCGGGC TTCTACTTCC ACAGGCTGCT CTACAGGGTC
TTCAGCGAGC CCGGGACCCC GTTCGTCCTC AAAGGCGGAC AGGGGATGCT CGCTAGGACC
GCCGACGCAC GCGCCACGCG CGACATCGAT CTTGCGACGG ACAGTATGGA CGTAGACGCC
GCGGTGGACG AGCTCGAGCG CCTCGCCGCC AAGGATGCAG ACGACTTCGT CACCTTCGAA
TTGAGAGGCG TGGCCCCGAT CAAAGGAGAG GACGCGTACC GCGACGGCTA CACCGTGGTC
TTCGACGCGT TCATCGGCCC GAAGAGGGTC CAGCGCGTCT CCGTCGACCT GGTGGCGGAC
TCGATCGCAA TCGGCGAACC CGACTATATG GCTCCCGCCG ACAGAATCGA CGTCCGGGGA
ATCCCCGTGT GTGACTACCC CGTCTACCCG TCGGCGCGGG CCGTCGCGGA CAAGGTCTGC
GGCATTGTCG AGCGCCACGC GGGCCGGCCG TCTTCCCGCG TGAAGGACCT CATGGACATC
GCGGCCTACG CGCTCACCGA TGACTTCGAT GCAGAAACTC TAGGGGCCGC GCTGAAGCGC
GAAGCCTCCG CAAGGCGGCT CTCGCTCGGT AGCGAATTCT CACTGCCCGC GGAATGGGGA
GACGCTCACG AGGCGCAGTA CTCGAAGCTT GCGGTCCAGG CAAGGATGTC CCAGGACATG
TCAACGCTCT CCGGTGCGCT ATCAATCTCC AGGGCACTAC TGGATCCCGT CCTCTCAGGA
TCGGCAACGG GATCGTGGAG CCATATCGCG CGCGCGTGGG TGGAGAGCAT CGTACGGGAC
GCACTATAA
 
Protein sequence
MGYSSPKALE MAVKDAAKAS PLDTNRAIAG FYFHRLLYRV FSEPGTPFVL KGGQGMLART 
ADARATRDID LATDSMDVDA AVDELERLAA KDADDFVTFE LRGVAPIKGE DAYRDGYTVV
FDAFIGPKRV QRVSVDLVAD SIAIGEPDYM APADRIDVRG IPVCDYPVYP SARAVADKVC
GIVERHAGRP SSRVKDLMDI AAYALTDDFD AETLGAALKR EASARRLSLG SEFSLPAEWG
DAHEAQYSKL AVQARMSQDM STLSGALSIS RALLDPVLSG SATGSWSHIA RAWVESIVRD
AL