Gene Shel_25030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_25030 
Symbol 
ID8396391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2771363 
End bp2772052 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID644987248 
Producthypothetical protein 
Protein accessionYP_003144859 
Protein GI257065187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTATT CGAGCAACAT ATCTGCAATC GAAGAGCTGG CCGCATCTGA AGGCGGCATC 
TTCACGAGCG GCCAGGCGGC GCGTGCGGGC GTGCCGCGCT ACGCCCTCTC GTACGCGGCA
AAGTCCGGCC GCATCGAGCG GCTACGGCAT GGGGCCTATC GGCTCTCATC TCTCCCTACG
ACCGCGCTCG ACGACCTCGT CGCCGCCTAC AAGCTCACCT CGCCAGACAG GCTCACCTAC
GAGCGCATGG GCGCAAGCTT CGACGGGGTC GCCGTATGCG GCGCAACGGC GGCGCACGCC
CTCGGAATCG GCGACCTGGA ACCTGAGCCG TGGCAGATCG CCGTCCCCAA ACGCTTCAAC
AGCCGAATGG ACGGCACGAA GTTCCGCGTT ATGGATCTCG GGCGAAGCGA CGTCGTGTGG
GCCGAGGGCG GGTTTCCCGT AACGAGGGTG GAGCGCACGA TCGCCGACCT CGCGATGGAG
GCCACGGAGG AGTCCCTGCT CGCCGACGTG CTCGCAGACG CAATCAGGCG CTACGGCGCG
ACGGAGCTCG ACATGCGCCG GCTGCGTGCC CTGCTCGGCG ACGGCCGCCT GCGCTCGCTC
CTCTCGGCAG CCGGGGCCTA CGAGGGCGGC CCGCGCGAGC TGGTGGAGCT CGACGGCCTG
GGCCATGCGG CCCTGATAGA GAGGGGTTGA
 
Protein sequence
MSYSSNISAI EELAASEGGI FTSGQAARAG VPRYALSYAA KSGRIERLRH GAYRLSSLPT 
TALDDLVAAY KLTSPDRLTY ERMGASFDGV AVCGATAAHA LGIGDLEPEP WQIAVPKRFN
SRMDGTKFRV MDLGRSDVVW AEGGFPVTRV ERTIADLAME ATEESLLADV LADAIRRYGA
TELDMRRLRA LLGDGRLRSL LSAAGAYEGG PRELVELDGL GHAALIERG