Gene Shel_24820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24820 
Symbol 
ID8396370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2748196 
End bp2748984 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID644987228 
Productcobalamin biosynthesis protein CbiK, Co2+ chelatase 
Protein accessionYP_003144839 
Protein GI257065167 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4822] Cobalamin biosynthesis protein CbiK, Co2+ chelatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGG CTTTGTTGGT TGTGAGCTTC GGTACGTCTG CTCCGGGTGT CGCCGAGAGG 
ACTATCGGCG CCGTGGAGCG CGCGCTTGCC CAGGCCATGC CCGAACGGGC CTTCTACAGC
TGCTGGACCT CGCGGGTGAT CTGCGCCAAG GTGGAACGGG AGACGGGCGT GCACCACATG
CAGCTGGCGG AAGCCCTCGA CGCCATGGCA ACGGCGGGCG TTTCCGACGT GCTGGTGCAG
CCGACGCACC TGATGCAGGG TCGGGAGAAT CGGGTCATGC TGGAAACCTT GCGCGAGCAC
GCCGGTGATT TCGACCGCAT TTGTTTGGGG AATACGCTGC TCACCTGCGA TGATGACTGC
ACAGCGCTGG CTCGCGCCAT CTGCAGCGCG TTCGCCGAGA TGCGCGGCGG CGACGCGTTG
GTGCTCATGG GGCACGGGTC GGCCTTCGGC GGAAACGAGG CGTTTTCGCG GATGCAGCAG
GCGTTCGGGC GCGTAGGGCG GGACGACGTC GTCGTCGCAA CGGTGGAAGG CGAACCTTCC
TTCGCGGATG CGCTTGCGTT CGTCGAGACC CGCAAGCCGT CGCGCATCTG GCTTGCGCCC
CTCATGATGG TGGCCGGCGA CCATGCCCAA AACGACATGG CGGGCTCCGA CCCGGATTCG
TGGGCGAGCC AGCTTGCGGC CCGCGGTTAC GAGGTGCTCC CGGTGCTGCG CGGCCTTGGG
GAATATCCCG AGGTCCAGAG CCTGTTCGTC AAGCATGCGC AGTGCGCTTA TCCGCTGGAG
CAGGCATGA
 
Protein sequence
MNKALLVVSF GTSAPGVAER TIGAVERALA QAMPERAFYS CWTSRVICAK VERETGVHHM 
QLAEALDAMA TAGVSDVLVQ PTHLMQGREN RVMLETLREH AGDFDRICLG NTLLTCDDDC
TALARAICSA FAEMRGGDAL VLMGHGSAFG GNEAFSRMQQ AFGRVGRDDV VVATVEGEPS
FADALAFVET RKPSRIWLAP LMMVAGDHAQ NDMAGSDPDS WASQLAARGY EVLPVLRGLG
EYPEVQSLFV KHAQCAYPLE QA