| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24520 |
|---|
| Symbol | |
|---|
| ID | 8396340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2716684 |
|---|
| End bp | 2717238 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644987198 |
|---|
| Product | transcriptional regulator, tetR family |
|---|
| Protein accession | YP_003144809 |
|---|
| Protein GI | 257065137 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCA CGAGAGACAC TAAGCGCATG TTCGCCGACG AGCTGGAGGC CATGATGGCC
CGCATGCCCT TGTCGAAGGT GCGGGTGGCG GACCTGTGCG CCCGGCTGCA CGTGGAGCGC
AGAGTGTTCT ATTACCACTT TAAAGACAAG TACGACCTGG TGGCGTGGGT GTTCGAGCAG
GACCATCTGG CGGCGTCGGA AAACGCGCAA CCCTACACGT TGGAGTTCTA CACAGAGTCC
CACAGGCGCC TGTGGGCGCG CCGGGATTTC TACCGACGCG CCTTCGAGGA GGATTCCCAG
AATTCGATCT ACCGGTATCT TCTGGAGTTC AGCATTCAGG CGAACGAGAC GGCGCTGCGG
CGTCACCTGG GGGTTCCCAA GCTTTCTCGG GAAATGGCCT TCGAGGCCAG ACACTTCGCC
CATGGCAACG TCGGCAGCGT GGTGGATTGG CTGCGGGGCG ATTTCGAAGC TACGCCGGTG
CAGCTTGCCG TCTGCATCTT CTCCTGTATT CCGGAGGTCT TGAGGGAGGC GTACCGTACG
CAAAGCGAAC TGTGA
|
|---|
| Protein sequence | MVATRDTKRM FADELEAMMA RMPLSKVRVA DLCARLHVER RVFYYHFKDK YDLVAWVFEQ
DHLAASENAQ PYTLEFYTES HRRLWARRDF YRRAFEEDSQ NSIYRYLLEF SIQANETALR
RHLGVPKLSR EMAFEARHFA HGNVGSVVDW LRGDFEATPV QLAVCIFSCI PEVLREAYRT
QSEL
|
|---|
| |