Gene Shel_24480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24480 
Symbol 
ID8396336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2712696 
End bp2713940 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content58% 
IMG OID644987194 
Productcobalamin biosynthesis protein CbiK, Co2+ chelatase 
Protein accessionYP_003144805 
Protein GI257065133 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4822] Cobalamin biosynthesis protein CbiK, Co2+ chelatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCT TCGTAAAATA TTTTGCTGCA ACGGCAATTG CAGCGCTGCT GGCCATGGCC 
TGCGTGGGTT GTGCGTCCGA AGAGACGCCC GCAACCGACG ATGCGGCTAC GACCAGCGAA
CAAGAGGCGC CTGCGGCGAC TAGCGAACCG GCAGCGACTA CCGAAGAGGC GGCAACCACC
GAGGTTACCC CGGAGGACGT CGACGAGCTC ATCGCAGCTA TTCAGGTTCA GGAATGGACC
GAAACCACCG CTGACGACTG TGCTGCAGCG AAGGCAGCTT GGGACGCTCT GTCCGACGAT
CAGAAGGCTC AGGTCGAAGA AGGCGACTAC TTCGCTCTCG ATACCGGCGA TGCCTCTGCG
GACGATCCTC TGAATCAGGA CGGAATCGGA GAGAACGAGA TTCTTGTCGT AAGCTTCGGC
ACGTCTTTCA ACGACAGCCG TGTTGCTGAC ATCGGTGGTG TCGAACGTGC CATCCAGGCC
GCATTCCCTG ATTGGTCGGT TCGCCGTGCC TTTACTGCTC AGATCATCCT GAACCACATT
ATGGCTCGTG ACGGCGAGGC CATTGACAAC GTCGACCAAG CGCTGCAGCG TGCTGCAGAC
AACGGCGTGA AGAATCTGGT CATCCAGCCG ACGCATCTCA TGCATGGTGC CGAATACGAC
GAACTCGTTG AGGCTACTGA GGCCTATGCC GATCAGATGA ACATTGTCAT CGCCGAACCG
CTGCTGGGCG AAGTCGGTGC TGACGCCACT GTTATCAATG ACGATAAGAA GGCTGTGGCT
GAAGCGGTTG TCGCCGAGGC TGTCGCCCAG GCTGGATACG CCAGCGTCGA GGAGATGGAT
GCAGACGGCG CCGCGCTGGT TCTTATGGGT CATGGAACCT CTCACGAGGC GAACGTAACG
TATAGCCAGA TGCAGACTAC GATGGACGAA CTGGGATACA AGAACGTGTT CATCGGTACC
GTCGAGGGCG AGCCTGAAGA AACTGAATGC AGCGTCGTTA TCGGCGAAGT TGAGAAGGGC
GGATATTCCA CGGTGTGGCT GCGTCCCATG ATGGTGGTTG CTGGTGACCA TGCCAACAAC
GACATGGCCG ATCCGGAGGA TCCGGAGTCT TGGGTCAGCA TGTTCACGGA TGCCGGTTCT
TTTGAGAACA TCGAGACGCA GGTCATGGGC CTGGGCGAGA TTCCTGCCGT GCAGGAGCTG
TATGTCGCCC ATACCGCAGC TGCGCTTGAG AGCATCGAAG GCTGA
 
Protein sequence
MKSFVKYFAA TAIAALLAMA CVGCASEETP ATDDAATTSE QEAPAATSEP AATTEEAATT 
EVTPEDVDEL IAAIQVQEWT ETTADDCAAA KAAWDALSDD QKAQVEEGDY FALDTGDASA
DDPLNQDGIG ENEILVVSFG TSFNDSRVAD IGGVERAIQA AFPDWSVRRA FTAQIILNHI
MARDGEAIDN VDQALQRAAD NGVKNLVIQP THLMHGAEYD ELVEATEAYA DQMNIVIAEP
LLGEVGADAT VINDDKKAVA EAVVAEAVAQ AGYASVEEMD ADGAALVLMG HGTSHEANVT
YSQMQTTMDE LGYKNVFIGT VEGEPEETEC SVVIGEVEKG GYSTVWLRPM MVVAGDHANN
DMADPEDPES WVSMFTDAGS FENIETQVMG LGEIPAVQEL YVAHTAAALE SIEG