| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_24270 |
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| Symbol | |
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| ID | 8396315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2686198 |
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| End bp | 2687076 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644987173 |
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| Product | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein |
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| Protein accession | YP_003144784 |
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| Protein GI | 257065112 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCTCG ATGGCAAGGT AATTCCCGGC GCTCATCATT TTACTTCCGA GCAGCTTGAG
ATTATTCTGA AGGCAGTTCC GGCCAATGTA TTCTTCAAGG ACCTGGATTG CCGATATCAG
TATGTGAGCC ACATCTGCGA CATGCTCAAC ACCGGCGGAA AGGGCACCAT CATCGGAAAG
ACCGACCCGG AAATTCAACC AGATCCCGAA CTCGGTCGGA AGTTCTACGA AGAGGACAAG
GAAATCATCC GCACGGGTGA GTCCATGAAG TACCTCCAGG AAATGACGTT CGGCCCCGAC
ACGTACTATT ACGAGATATC CAAAATGCCC GTCATCGATT CGGATGGCGA AATCATGGGC
GTCATCGGCA TGGTCTCCGA CATGACCGAG CAGATTCTCA CGCAGCGTAA ACTGGAAGCC
TACAGCCAAA TCGACTCCAT GACGGGCGTG TTCAACCGCA CGTTTTTCAA CAAGTTCCTG
GACGACGCCA AAGACGTGAA TCAGCCCATG GCCGTCATCA TGGCGGACTG CAACTATCTG
AAAACGTTCA ACGACAACTA CGGGCATTCC ATGGGCGACC AGCTCATCAA GTCCACGGTT
GAGAACATCC AGCAAGTCAT CGGCGAACAG GGCAAGGTGG TGCGCTGGGG CGGCGACGAA
TTCCTGCTCA TCATCCCGAA CTGCGACGAA GCCGCCTGCG AGCAGATCGT CAATCGTCTG
CAGGAGACAG AATCCAACGT CATCGTGTGC GGAAACCCCC TCAGCACCTC CTACGGATAC
GCCATCGTCA CGCAGGATGT GCCGCTTGAG CAGGCCATTG ACATTGCCGA CAAACGCATG
TACGCCGCAA AGCAGGCCCT CAAGAACGCC ATCGCGTAA
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| Protein sequence | MSLDGKVIPG AHHFTSEQLE IILKAVPANV FFKDLDCRYQ YVSHICDMLN TGGKGTIIGK
TDPEIQPDPE LGRKFYEEDK EIIRTGESMK YLQEMTFGPD TYYYEISKMP VIDSDGEIMG
VIGMVSDMTE QILTQRKLEA YSQIDSMTGV FNRTFFNKFL DDAKDVNQPM AVIMADCNYL
KTFNDNYGHS MGDQLIKSTV ENIQQVIGEQ GKVVRWGGDE FLLIIPNCDE AACEQIVNRL
QETESNVIVC GNPLSTSYGY AIVTQDVPLE QAIDIADKRM YAAKQALKNA IA
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