Gene Shel_24130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24130 
Symbol 
ID8396301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2671093 
End bp2672403 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content60% 
IMG OID644987159 
Productsugar phosphate permease 
Protein accessionYP_003144770 
Protein GI257065098 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAA CCGCGAATGG AGTATCGAAG CGCTGGCTTC TGCTCGTTAT CACTTTCGTC 
CTGCTGTGCT TCTTCGGCCT GATTTACGCA TGGTCGCTGT TCATCGAGCC TCTGGAGTCC
AATTTCGGAT GGCAGCGCTC GCAGACGTCC GCCATTTTCA CCATTTCGTG CGTGACGGTA
TGCCTCGGCA TGGTGGTGTC CGGCGTGCTT ACCAGCAAGT TCAACTACCG CTTGGTCATG
GCCGTATCCG CCATCATGAT TTCCATCGGT TTCATCGCAT CGGCCTTCTG CAATTCCCTC
ATTGAGATTT TCATCTATTA CGGTGTGCTG GTCGGCACGG GTGTGGGCAT CGGCTTCAAC
TGCGCCATCA ACACCACGCT CAACTGGTTC CCCGATAAGC AGGGCATCGT TTCCGGCGCA
TTGCTCATGG GTTACGGTGG AGGCGCCATG ATCCTGAGCC CCCTGGTCAC CATGCTGCTC
GGCGTTCTCG ACTGGCGCAT GACCTTCGGC GTGCTGGGCG TTCTGTTCGG CGTCCTGGTC
ATCCTTGGCG CGATTCTGCT CCGCAATCCT TCGCCTGAAC AGGTGGCACC CCTGCTCGCT
CGGGCCCGCG AAAACAACAT CGTATCCTCT GTTGACTACA CTCCCGTCCA GATGATCAAG
ACCCCCGCTT TCTGGATCTG CTTCATCTGG CTGACCCTGA GCACCAGCGG CGGACTTGCC
CTGATCAGCC AGGCGGTTCC CGCCGCCATG GAGGTGCTTG AATCCGCCGG CGCCGGCACT
GGCGCGGCTG TGCTGGCAAC CGCCACGGCA GCCATGGGCA GCGTCTCGCT GTGCAACGGC
CTGGGTCGTC TCATCAACGG TTTCGTGTGG GACAAGCTCG GCTACCGCGC ATCCTTCACG
TGGATTTCCC TCGCTTTCAT GGCCGGCATG GTATGCTGCG CCCTCGCCGT GAAGGCTGCT
AGCTTCCCGC TGCTCGTGGT CGGCTTCGTC CTGCTCGGCC TCACGTTCGG CGGTACCATG
TCCGCTACCT CTGCCGTATG CGGCACGTTC TTCGGGACGA AGCATTTCGG CATCAACTAC
GCCCTGATGT GCTGCCAGAT GATTCCTGCA GCCATCATCG GACCGACGCT GCTTGCGGCA
ACTCAGTCCG GTTCGGGCAG CTACGGCCCT GCATTCTGGG CGTTCTTCGC TCTGGCAGTG
GTCACCGCAG TGTCCTCCAT CGCCATTAGG CGACCCAAGC AGCAAGCTCA AATAGAAATA
CCGGATGGTC TGTTTAACGC AGTCGACGAA AGCGTTCAAC AGCCCGCATA G
 
Protein sequence
MSQTANGVSK RWLLLVITFV LLCFFGLIYA WSLFIEPLES NFGWQRSQTS AIFTISCVTV 
CLGMVVSGVL TSKFNYRLVM AVSAIMISIG FIASAFCNSL IEIFIYYGVL VGTGVGIGFN
CAINTTLNWF PDKQGIVSGA LLMGYGGGAM ILSPLVTMLL GVLDWRMTFG VLGVLFGVLV
ILGAILLRNP SPEQVAPLLA RARENNIVSS VDYTPVQMIK TPAFWICFIW LTLSTSGGLA
LISQAVPAAM EVLESAGAGT GAAVLATATA AMGSVSLCNG LGRLINGFVW DKLGYRASFT
WISLAFMAGM VCCALAVKAA SFPLLVVGFV LLGLTFGGTM SATSAVCGTF FGTKHFGINY
ALMCCQMIPA AIIGPTLLAA TQSGSGSYGP AFWAFFALAV VTAVSSIAIR RPKQQAQIEI
PDGLFNAVDE SVQQPA