Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_24130 |
Symbol | |
ID | 8396301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2671093 |
End bp | 2672403 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644987159 |
Product | sugar phosphate permease |
Protein accession | YP_003144770 |
Protein GI | 257065098 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAAA CCGCGAATGG AGTATCGAAG CGCTGGCTTC TGCTCGTTAT CACTTTCGTC CTGCTGTGCT TCTTCGGCCT GATTTACGCA TGGTCGCTGT TCATCGAGCC TCTGGAGTCC AATTTCGGAT GGCAGCGCTC GCAGACGTCC GCCATTTTCA CCATTTCGTG CGTGACGGTA TGCCTCGGCA TGGTGGTGTC CGGCGTGCTT ACCAGCAAGT TCAACTACCG CTTGGTCATG GCCGTATCCG CCATCATGAT TTCCATCGGT TTCATCGCAT CGGCCTTCTG CAATTCCCTC ATTGAGATTT TCATCTATTA CGGTGTGCTG GTCGGCACGG GTGTGGGCAT CGGCTTCAAC TGCGCCATCA ACACCACGCT CAACTGGTTC CCCGATAAGC AGGGCATCGT TTCCGGCGCA TTGCTCATGG GTTACGGTGG AGGCGCCATG ATCCTGAGCC CCCTGGTCAC CATGCTGCTC GGCGTTCTCG ACTGGCGCAT GACCTTCGGC GTGCTGGGCG TTCTGTTCGG CGTCCTGGTC ATCCTTGGCG CGATTCTGCT CCGCAATCCT TCGCCTGAAC AGGTGGCACC CCTGCTCGCT CGGGCCCGCG AAAACAACAT CGTATCCTCT GTTGACTACA CTCCCGTCCA GATGATCAAG ACCCCCGCTT TCTGGATCTG CTTCATCTGG CTGACCCTGA GCACCAGCGG CGGACTTGCC CTGATCAGCC AGGCGGTTCC CGCCGCCATG GAGGTGCTTG AATCCGCCGG CGCCGGCACT GGCGCGGCTG TGCTGGCAAC CGCCACGGCA GCCATGGGCA GCGTCTCGCT GTGCAACGGC CTGGGTCGTC TCATCAACGG TTTCGTGTGG GACAAGCTCG GCTACCGCGC ATCCTTCACG TGGATTTCCC TCGCTTTCAT GGCCGGCATG GTATGCTGCG CCCTCGCCGT GAAGGCTGCT AGCTTCCCGC TGCTCGTGGT CGGCTTCGTC CTGCTCGGCC TCACGTTCGG CGGTACCATG TCCGCTACCT CTGCCGTATG CGGCACGTTC TTCGGGACGA AGCATTTCGG CATCAACTAC GCCCTGATGT GCTGCCAGAT GATTCCTGCA GCCATCATCG GACCGACGCT GCTTGCGGCA ACTCAGTCCG GTTCGGGCAG CTACGGCCCT GCATTCTGGG CGTTCTTCGC TCTGGCAGTG GTCACCGCAG TGTCCTCCAT CGCCATTAGG CGACCCAAGC AGCAAGCTCA AATAGAAATA CCGGATGGTC TGTTTAACGC AGTCGACGAA AGCGTTCAAC AGCCCGCATA G
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Protein sequence | MSQTANGVSK RWLLLVITFV LLCFFGLIYA WSLFIEPLES NFGWQRSQTS AIFTISCVTV CLGMVVSGVL TSKFNYRLVM AVSAIMISIG FIASAFCNSL IEIFIYYGVL VGTGVGIGFN CAINTTLNWF PDKQGIVSGA LLMGYGGGAM ILSPLVTMLL GVLDWRMTFG VLGVLFGVLV ILGAILLRNP SPEQVAPLLA RARENNIVSS VDYTPVQMIK TPAFWICFIW LTLSTSGGLA LISQAVPAAM EVLESAGAGT GAAVLATATA AMGSVSLCNG LGRLINGFVW DKLGYRASFT WISLAFMAGM VCCALAVKAA SFPLLVVGFV LLGLTFGGTM SATSAVCGTF FGTKHFGINY ALMCCQMIPA AIIGPTLLAA TQSGSGSYGP AFWAFFALAV VTAVSSIAIR RPKQQAQIEI PDGLFNAVDE SVQQPA
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