| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23550 |
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| Symbol | |
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| ID | 8396244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2608136 |
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| End bp | 2609848 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644987102 |
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| Product | prolyl-tRNA synthetase, family II |
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| Protein accession | YP_003144713 |
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| Protein GI | 257065041 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000284536 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0091674 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAAC ATCTCAACCG CAACATCCTG CGCATGAGCA CTATGTATGT GCCCACGCTG
AAGGAGGACC CTTCGGATGC CGACATCCCT TCGGCTAAGC TGCTGACCCG TGCGGGCATG
ATCCGCAAGG AGGCCGCCGG CCTGTACTCC TTCCTGCCGC TGGGCCTGCG TGTGCTGCGC
AAGATCGAGA ACATCGTCCG TGAGGAGATG GACTCCCACG GCGGCGAGGA GCTGCTGATG
CCCTTCGTGC AGTCCGCCGA CCTGTGGCGC CAGAGCGGCC GTTGGGGCGC GTACGGCGAA
GAGATGATGA CCATGCGTGA CCGCCACGAC AACGAGTTCT GCCTCGGCCC CACCGCCGAA
GAGGTCATCA CCGACCTGGT GAAGAACGAG CTTCGCAGCT ACAAGGACCT GCCGAAGAAC
CTCTACCACA TTCAGCTCAA GTTCCGCGAC GAGCGCCGTC CCCGCTTCGG CCTGCTGCGC
AGCCGCGAGT TCATCATGAA GGACGCCTAT TCTTTCGATA AGGACCAGGA AGGTCTGGAG
GTCAACTATC AGCTGATGCG CGACGCCTAC AGCAGGATGT GCGAGCGCAT GGGCATGGAG
TACCGCATCG TCCAGGCCGA CCCGGGCGAA ATCGGCGGCA ACGGCACCGA GGAGTTCATG
ACCTTGGCCG AAACCGGCGA GGCCGAGCTG GTCTACTGCG ACTGCGGCTA CGCCGCCGAC
GTCGAGGTGG GCGAGTGCCA TCCCAACCCC GTCGGATACG TCGGCGACAC CATGGAGAAG
ATCGCCACGC CTGGCCTGCA CACCATCGAA GAGCTGGCCG ATTTCCTGGG CATCGAGGCC
GACGGCACCG TCAAGGCGTT CTCCGGCAAG GACAAGGAAG GCGCCATCTG GGTGCTGTTC
GTCCCTGGAA ACTACGAAGT GAACGAGGAC AAGGCGGCGC ATGTGGTGCG CGGCTTCGAG
CCTCTTACCG ATGAGGAAAT GAAGGATGCG GGCCTGGTCA AGGGCTCTAT GGGACCGGTC
GGTCTACCCG AAGGCGTGCG CATCTGTGCT GACGACAGCC TGCGCGACGT CGAGCGCTGG
ATTGTCGGCG CCAACGAGGA GGGCTACCAC CTGCTCGGCG CCAAGCAGGG CGAAGACTTC
ACGGTCGACG CCTGGGGCGA TTTGTGCACC GTCGTCGCCG GCGATGCCTG CCCCTGCTGC
GGCAAGCCCC TGCAGGCCGC CCGCGGCATC GAGGTCGGTC AGATCTTCAA GCTGGGCACC
AAGTACTCCG AGGCCATGGG CGCCCTGTTC ATGGATGAGG ACGGCACCGA GAAGCCCTTC
ATCATGGGCT GCTACGGCGT CGGCGTGTCC CGCTGCATGG CCGCTGCCGT CGAGCAGAGC
CACGACGACA TGGGCATCAT CTGGCCTGTC GGCATCGCCC CGGCTCACGT GGCGGTCATT
CCGCTGTCCA CGAAGCCTGA CGAGGTTACG GAAGCCGCCG AGGACGTCGC CGCCAAGCTG
GCTGCCGCCG GTCTGGAGGT TTGCATCGAC GACCGCGACG AACGTGCCGG TGTGAAGTTC
GCCGACAACG ACCTCATTGG CTGGCCTGCC CAGGTCGTCA TCGGCAAGCG CGGCCTTGCT
GCCGGCACCG TCGAAGTGAA GAACCGCAAG ACGGGCGAGA AGACCGACGT TGCGGTTGAT
GATGTCGTGT CGTTCGTGGA GTCGCTGCTT TAA
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| Protein sequence | MNKHLNRNIL RMSTMYVPTL KEDPSDADIP SAKLLTRAGM IRKEAAGLYS FLPLGLRVLR
KIENIVREEM DSHGGEELLM PFVQSADLWR QSGRWGAYGE EMMTMRDRHD NEFCLGPTAE
EVITDLVKNE LRSYKDLPKN LYHIQLKFRD ERRPRFGLLR SREFIMKDAY SFDKDQEGLE
VNYQLMRDAY SRMCERMGME YRIVQADPGE IGGNGTEEFM TLAETGEAEL VYCDCGYAAD
VEVGECHPNP VGYVGDTMEK IATPGLHTIE ELADFLGIEA DGTVKAFSGK DKEGAIWVLF
VPGNYEVNED KAAHVVRGFE PLTDEEMKDA GLVKGSMGPV GLPEGVRICA DDSLRDVERW
IVGANEEGYH LLGAKQGEDF TVDAWGDLCT VVAGDACPCC GKPLQAARGI EVGQIFKLGT
KYSEAMGALF MDEDGTEKPF IMGCYGVGVS RCMAAAVEQS HDDMGIIWPV GIAPAHVAVI
PLSTKPDEVT EAAEDVAAKL AAAGLEVCID DRDERAGVKF ADNDLIGWPA QVVIGKRGLA
AGTVEVKNRK TGEKTDVAVD DVVSFVESLL
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