Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23480 |
Symbol | |
ID | 8396237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2597262 |
End bp | 2598164 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987095 |
Product | predicted acetamidase/formamidase |
Protein accession | YP_003144706 |
Protein GI | 257065034 |
COG category | [C] Energy production and conversion |
COG ID | [COG2421] Predicted acetamidase/formamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00543842 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000756798 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTCGAAC TGAACGATGA TGCCGTATTC TACGCGTTTT CGGCCGACTT GGAACCGGTG ATGACCATCA AGTCTGGCGA TACGGTTCGC ATCCGCACCC AGGACTGCTT CGCCAACCAG CTTAAGGCCG ACAACACCAT CGACGGTCTG GACTGGGATC GCGTGAATCC CGCCACCGGC CCCATCTATA TCGAAGGTGC CGAGCCGGGC GACGTTCTCA AGGTCCACCT GCATGCCATC GATGTGGATT CTAAGGCGTG CATGTGCACC GGCGAAGCCG AAGGCACCTG TGGCGACCTG TTCGCTGACG GCCTGGTCAA CGTGGTCAAG CCCGTCGTCG ACGGCAAGCT CATCTGGGAC GAGGGCGTCG AGCTCGATTG TCGTCCCATG ATCGGCGTCA TCGGCGTGGC TCCTGAGCCG GGCAAGTCCA TCAACTGCGG AACGCCCGAC CACCATGGCG GCAACATGGA CACCACGATC ATCGAGGCCG GCGCCACGCT GTACTTCCCG GTCTCCGTCG AAGGCGCCCT TTTCGGCTGC GGCGACGTGC ATGCCGTCAT GGGCGATGGT GAAATCAGCG TCTCCGGCGC CGAAATCGCT TCGTGGGTCA CGGCTTCCTT CGAGGTGCTC AAGGACCGCT CCCTTACCAA CCCGGCGTTG CTGAACGACA CCCAGTTCTG CACCATCGCT TCCGAACCTT CTCTGGACGC CGCTTGCGAC ACGGCCGTTC ACGATATGGT CCGCATCCTC AGCGAGCGCT GCGAAGGCAT CTCCACCGAG GACCTGGTCA TGCTGCTGTC GCTGTGCGCC GACGTTCAGG TAAGCCAGAT CGTCGACCCG CAGAAAACTG CTCGTTTTGT GGTTCCGCGT CGCGTTGTTG AAGCTTACGG GTTCACCTGG TAG
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Protein sequence | MLELNDDAVF YAFSADLEPV MTIKSGDTVR IRTQDCFANQ LKADNTIDGL DWDRVNPATG PIYIEGAEPG DVLKVHLHAI DVDSKACMCT GEAEGTCGDL FADGLVNVVK PVVDGKLIWD EGVELDCRPM IGVIGVAPEP GKSINCGTPD HHGGNMDTTI IEAGATLYFP VSVEGALFGC GDVHAVMGDG EISVSGAEIA SWVTASFEVL KDRSLTNPAL LNDTQFCTIA SEPSLDAACD TAVHDMVRIL SERCEGISTE DLVMLLSLCA DVQVSQIVDP QKTARFVVPR RVVEAYGFTW
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