Gene Shel_23480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_23480 
Symbol 
ID8396237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2597262 
End bp2598164 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content61% 
IMG OID644987095 
Productpredicted acetamidase/formamidase 
Protein accessionYP_003144706 
Protein GI257065034 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00543842 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000756798 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCGAAC TGAACGATGA TGCCGTATTC TACGCGTTTT CGGCCGACTT GGAACCGGTG 
ATGACCATCA AGTCTGGCGA TACGGTTCGC ATCCGCACCC AGGACTGCTT CGCCAACCAG
CTTAAGGCCG ACAACACCAT CGACGGTCTG GACTGGGATC GCGTGAATCC CGCCACCGGC
CCCATCTATA TCGAAGGTGC CGAGCCGGGC GACGTTCTCA AGGTCCACCT GCATGCCATC
GATGTGGATT CTAAGGCGTG CATGTGCACC GGCGAAGCCG AAGGCACCTG TGGCGACCTG
TTCGCTGACG GCCTGGTCAA CGTGGTCAAG CCCGTCGTCG ACGGCAAGCT CATCTGGGAC
GAGGGCGTCG AGCTCGATTG TCGTCCCATG ATCGGCGTCA TCGGCGTGGC TCCTGAGCCG
GGCAAGTCCA TCAACTGCGG AACGCCCGAC CACCATGGCG GCAACATGGA CACCACGATC
ATCGAGGCCG GCGCCACGCT GTACTTCCCG GTCTCCGTCG AAGGCGCCCT TTTCGGCTGC
GGCGACGTGC ATGCCGTCAT GGGCGATGGT GAAATCAGCG TCTCCGGCGC CGAAATCGCT
TCGTGGGTCA CGGCTTCCTT CGAGGTGCTC AAGGACCGCT CCCTTACCAA CCCGGCGTTG
CTGAACGACA CCCAGTTCTG CACCATCGCT TCCGAACCTT CTCTGGACGC CGCTTGCGAC
ACGGCCGTTC ACGATATGGT CCGCATCCTC AGCGAGCGCT GCGAAGGCAT CTCCACCGAG
GACCTGGTCA TGCTGCTGTC GCTGTGCGCC GACGTTCAGG TAAGCCAGAT CGTCGACCCG
CAGAAAACTG CTCGTTTTGT GGTTCCGCGT CGCGTTGTTG AAGCTTACGG GTTCACCTGG
TAG
 
Protein sequence
MLELNDDAVF YAFSADLEPV MTIKSGDTVR IRTQDCFANQ LKADNTIDGL DWDRVNPATG 
PIYIEGAEPG DVLKVHLHAI DVDSKACMCT GEAEGTCGDL FADGLVNVVK PVVDGKLIWD
EGVELDCRPM IGVIGVAPEP GKSINCGTPD HHGGNMDTTI IEAGATLYFP VSVEGALFGC
GDVHAVMGDG EISVSGAEIA SWVTASFEVL KDRSLTNPAL LNDTQFCTIA SEPSLDAACD
TAVHDMVRIL SERCEGISTE DLVMLLSLCA DVQVSQIVDP QKTARFVVPR RVVEAYGFTW