| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23180 |
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| Symbol | |
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| ID | 8396207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2571600 |
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| End bp | 2573252 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644987065 |
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| Product | succinate dehydrogenase/fumarate reductase flavoprotein subunit |
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| Protein accession | YP_003144676 |
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| Protein GI | 257065004 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0317036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA CGATGACACG CCGCTCGTTC GCAGGCCTGA TGGTCGTTGC CGCAGGCACC
GCCCTGGCAG GTTGCGCTTC CAGCGGCTCC GAATCCAGCG CAGAGACCGA AATGGCCTCC
GAGGCCCAAT CCGCCGACTT GATCGTCATC GGCGGCGGCT GCGGAGGCCT CGCCGGTGCC
GCCAAGGCGG CCCAGGGCGG CGCAAGCGTC ATCGTCCTGG AGGGCTCGGG CGCCCTTGGC
GGCACCACGG CCATTTGCGG CGGCCACTAC AAGTTTATGG ACGACGACTT GCTGGCGCTG
CTCCCCGAGC GCACCGCAGA AAGCGACGAG CTTCTCAAGC CCTATCTGGA GATGACCGAC
GCGGACGTTC CCGAGGACTA CGTCGAATGC CTCGAGATGC TCCAGCAGCA GATTTCGGAA
TACCTCGAAT CCGACGAGAC CCGCGAATTC GACTCGCTGG AATACTGGAT CATCCTGCAC
TACCTGGGCA CCACCGGCGA CCAGCTCGAT CCCAACCATG AGGTAGTGGC CCCGGCCTAC
GATCTGATCT ACCCCGCCTA CGCCAATCAG GCAGCCATCA AGGACTGGCT GGTCGAGGGC
GGCTTCGAAT ACGAAGCCTT CGGCAACAAC CAGGATGCCG GCGGCCCCTT CTCCGTCAAC
CCCACCGGCC CGGTCGCACA GGGCGGCGCC TTCATTTCGG TGCTGAGCAC CTACGCCGAA
GACGCCGGCG CCCAGATCGT CAAGAAGGCC AAGGTGAACG CCCTGGTTGA GGACGGCGGC
CGTATCGTCG GCGTCATGAC CGAAGACGGC ACCACGTATA TGGCGAACCA AGCGGTGCTG
CTGGCCAGCG GCGGCTTCGG GTCCAACGCC CCGAAGGTAT CCGAAGAGGA CGTCCGCTGG
GAGTTCGGTC CTGAAGGACT GGGCAGCTGC GAGCCGGAAT GCAACGATGG CACGGCTCTT
GAGGCCGCCG TATCCATCGG CGCTGCCACG TCGAACATGG GCTTCAACCA GTATCAGACG
TTCAGCGCGA ACGGTCTGGC CACTATCGAG ACCACCATCC CCATGTGCAT GATGGCATCC
AAGATGGCCG TCAACAAAGA GGGCGTGCGC TTCCGCGACG ACTCCATGCG CTTCGGCACG
CAGAGCTCGT CGATCTCGCT GGGACAGACC GACAACATGT ACTACATGAT CGGCGATGCC
AGCGGTCTTG AGGCCATGGG CGACCTGAAG GACCGTTACG AGAAGAGCGG TGACCTGTTT
GTGGCTGACA CGATCGAAGA GGCCGCCAAC GCCGCAGGAC TTGACGGCAC CGTTGTGGCC
GCCGAGGTCG AGAAGTTCAA CAGCTACGTT GAGGCTGGCG AGGATCCTGA CTTCGGACGC
CATTTCTCCG AGCGTGACAG CAAGATCGAA GGCGCCCCTT ACACCATCAT GGCCATGCGC
GAATACGTGC AGCACACGAT GGGCGGCGTC ATGATCGACG CAACGGGCCA CGTGCTCGAC
GAGGGCGGCA ATCCCATCGA GGGCCTGTTC GCAGCTGGCG AAGCCGTCGG CAACCTGGAC
GGCGCCCAGC GTCGCCACGG CGACAACTTC GCCCACATCC TGTACTACGG ATGCCTGGCC
GGCGAAACCG TCGCCGCTGC CGTGAACGCA TAA
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| Protein sequence | MKTTMTRRSF AGLMVVAAGT ALAGCASSGS ESSAETEMAS EAQSADLIVI GGGCGGLAGA
AKAAQGGASV IVLEGSGALG GTTAICGGHY KFMDDDLLAL LPERTAESDE LLKPYLEMTD
ADVPEDYVEC LEMLQQQISE YLESDETREF DSLEYWIILH YLGTTGDQLD PNHEVVAPAY
DLIYPAYANQ AAIKDWLVEG GFEYEAFGNN QDAGGPFSVN PTGPVAQGGA FISVLSTYAE
DAGAQIVKKA KVNALVEDGG RIVGVMTEDG TTYMANQAVL LASGGFGSNA PKVSEEDVRW
EFGPEGLGSC EPECNDGTAL EAAVSIGAAT SNMGFNQYQT FSANGLATIE TTIPMCMMAS
KMAVNKEGVR FRDDSMRFGT QSSSISLGQT DNMYYMIGDA SGLEAMGDLK DRYEKSGDLF
VADTIEEAAN AAGLDGTVVA AEVEKFNSYV EAGEDPDFGR HFSERDSKIE GAPYTIMAMR
EYVQHTMGGV MIDATGHVLD EGGNPIEGLF AAGEAVGNLD GAQRRHGDNF AHILYYGCLA
GETVAAAVNA
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