Gene Shel_22890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22890 
Symbol 
ID8396178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2537554 
End bp2538345 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID644987037 
ProductN-dimethylarginine dimethylaminohydrolase 
Protein accessionYP_003144648 
Protein GI257064976 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1834] N-Dimethylarginine dimethylaminohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAT TCAACCATGT CATCGTTCGC CGTCCCGGCA AATCGCTGTG CGACGGTATC 
ACCAGTGCAC CTGAACTGGG CAAACCCATC TACGAGAAGG CCATCGTCCA GCACGACGCC
TACATCGAGT GCCTCAAGCA GTGCGGCGTG GAAGTCACCG TGCTTCCGGC CCTGGAGGAA
TACCCCGACT CCTGCTTCGT CGAGGACACC TGCGTCATCA CCCGTAAGGG CGCCATTATG
GACAACCCGG GCGCCGGCAG CCGCAACGGC GAGGCCAAGG AGATGGAGCC CACCATCCGC
AAGTTCTTCG ACGATGAGCA CATCAAGCAT ATCGTGGCCC CCGGCACCCT CGAGGGCGGC
GACGTCATGA TGGTCGGCGA CACCTTCTAC GTGGGCAAAT CCGCCCGTAC CAACGAAGAG
GGCATCCGCC AGTTCGCCGA GATTCTGGAA GGCTGGGGCC TCAAGTGCGT CGAGGTGCCG
CTGGAGCTGG TGCTGCATCT GAAGACCGGC GTGAACTACC TGGAGAACAA CAACATGCTG
GTCTCCGGCG AGTTCATCAC CAAGCCTGAG TTCGAGCAGT ACAACAAGGT CATCGTGCCC
GAGGAAGAGG CCTACGGCGC AAACTGCATC TGGGTGAACG GCAAGGTCAT CGTGCCTGAG
GGCTACCCCA CCGTCGAGCA GGCCGTTCGT GACCTGGGCT ACGAGGTCAT CGTCACCGAC
ACCTCCGAAT ACCGTAAGAT CGACGGCGGC CTGAGCTGCT TGTCCCTGCG TTTCTGGGTG
GACGAGGACT AA
 
Protein sequence
MTKFNHVIVR RPGKSLCDGI TSAPELGKPI YEKAIVQHDA YIECLKQCGV EVTVLPALEE 
YPDSCFVEDT CVITRKGAIM DNPGAGSRNG EAKEMEPTIR KFFDDEHIKH IVAPGTLEGG
DVMMVGDTFY VGKSARTNEE GIRQFAEILE GWGLKCVEVP LELVLHLKTG VNYLENNNML
VSGEFITKPE FEQYNKVIVP EEEAYGANCI WVNGKVIVPE GYPTVEQAVR DLGYEVIVTD
TSEYRKIDGG LSCLSLRFWV DED