Gene Shel_22830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22830 
Symbol 
ID8396172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2531843 
End bp2532880 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content63% 
IMG OID644987031 
Productpredicted deacylase 
Protein accessionYP_003144642 
Protein GI257064970 
COG category[R] General function prediction only 
COG ID[COG3608] Predicted deacylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAG AATCCCTGTT CAGCCTTGCA ATGCCATACC GCCAGGACAT GGAGGTCAGG 
TCGTTTTCCT TCGGGGTGAC GCCTGACGGC CGCGTGCTGG GAGGCGAAGG TGACGCCGCC
GCCCGGCCCG AAGAGTTCGA GAACGCCATC TGCTTTGTGG CCGGAATTCG CGGCAACGAG
GTCCAGCAGA CCTATATATG TGCGCGTCTC GTGCACAAGC TGCGCCGCCT GGAGGCGGAG
GGTTCCATCG TGCCTGGCCA GCGCATCATG GTGGTGCCCT GCGTGAACCC GGCATCCATG
AACAACCGCA AACGCTTCTG GGTGGGCGAC AACACCGACG TGAACCGCAT GATGCCCGGC
TACAACCTGG GCGAAACCAC CCAGCGCATC GCCGCGGCTC TGTTTGAACG CGTTCAGGGC
TTCCGCTACG GCGTCCATTT CTCCAGTTAC TATCTCGAGG GCGACTTCAT GGAACACGTT
CGCGTTATGA ACGGCCCCGG CATCCAGACC GACAACGGTG CGGATTTCGG GCTGGCCTAT
GTGCTGAACC ACGTGCCTGG TTCCTTCGAC ACCACGACGC TGCATTACAA CTGGCGCCTG
TGGGACACGG AGGCCTACAC CCTCTATACC AAAGAAACCG ACCTGGTGGA CGAGAACTCC
GCGGCCACTA TTGTCCGCGC CTGCCTGCGG TTTTTGGATG CCCGCGGCAT CATCGACCGT
CCCTGCCATG GCGGGATGCG CTCCACGACT TTCGCCGAGC GCGGCCTGGT GCCCGTGCAG
GTCAACTGCG GCGGCGTGTT CAAGCGGGTT GCCGAGCTTG GTGACATCGT TCGTTCCGGA
CACGTTCTGG CCCAAGTCAT TGACCCGCTG CGCGGCGACG TGCTTGAAGA GGTCAAGGCA
CCCCACGGCG GCGTGGTCTT CTTCGCGTGC CGCGCGCCTC TGGTCAACGA GCAGACGCTG
GCGTTCCAAA TCGTGCCCCG CTCGATCAGT GGCGACCTGC TCGGCGAGCG TGGCAACTTC
CTTGATCCCG AGGCTTAG
 
Protein sequence
MLEESLFSLA MPYRQDMEVR SFSFGVTPDG RVLGGEGDAA ARPEEFENAI CFVAGIRGNE 
VQQTYICARL VHKLRRLEAE GSIVPGQRIM VVPCVNPASM NNRKRFWVGD NTDVNRMMPG
YNLGETTQRI AAALFERVQG FRYGVHFSSY YLEGDFMEHV RVMNGPGIQT DNGADFGLAY
VLNHVPGSFD TTTLHYNWRL WDTEAYTLYT KETDLVDENS AATIVRACLR FLDARGIIDR
PCHGGMRSTT FAERGLVPVQ VNCGGVFKRV AELGDIVRSG HVLAQVIDPL RGDVLEEVKA
PHGGVVFFAC RAPLVNEQTL AFQIVPRSIS GDLLGERGNF LDPEA