Gene Shel_22800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22800 
Symbol 
ID8396169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2530005 
End bp2530724 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content59% 
IMG OID644987028 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003144639 
Protein GI257064967 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACG AACTTGAGAC CACGGCGGCG GAGGAAGAGG CCGCATACCT TGCCGACCTG 
GCGAAGCTGA ACCACCAACG TGCCGCGACC TACGGGCTGC TGGCGCGTAT GTACCGCGTG
GAAATCGACA GGGAGCAGCT CGAGGCAATG CGTGGGATGC GCTTCCCGGC GGCCACGGGC
AACGAGGACT CCGACAAAGG GTTCTTGATG CTGGCCCGCT ACCTGAGCCG TGCATGGGAC
AACACCATCA CCGAGCTTGC CGTCGATTAC GTGCGCGTGT TCATCGGCAG CACCAACCAG
CTTGACGGGG CGGCGTTCCC CTTCGAGAGT GTCTACACGT CGGAAAAGCG CCTGATGATG
CAGGATGCCC GCGACGAGGT GCTGGCGATT TACCGCGCCT ACGGCCTGTC AAAGGACGAG
AGCTGGCGCG AAGGGGAGGA CCACATCGCG CTGGAGCTGG AGTTCATGAA GGTGCTGAGC
GAACGCATCG CCGCAGCGTT GGAATCGGGC AACGAGGATA CGGCATACGA TTTGATGGTT
GCCCAGCTGA ATTTCCTCCA GGACCATCTG CTCTCTTGGG CGCCCTTGCT TACCGTGGAT
ATGCGACGCT TCGCGAAAAC CGATTTCTAC CTGGCGCTTT CCTACCTTAC CGATGGTTTT
TTGGAAACCG ACAAAGAGTA CTTGCTGGAC ATGCTGACCG AAGTTGAAGA AGACGAATAG
 
Protein sequence
MADELETTAA EEEAAYLADL AKLNHQRAAT YGLLARMYRV EIDREQLEAM RGMRFPAATG 
NEDSDKGFLM LARYLSRAWD NTITELAVDY VRVFIGSTNQ LDGAAFPFES VYTSEKRLMM
QDARDEVLAI YRAYGLSKDE SWREGEDHIA LELEFMKVLS ERIAAALESG NEDTAYDLMV
AQLNFLQDHL LSWAPLLTVD MRRFAKTDFY LALSYLTDGF LETDKEYLLD MLTEVEEDE