| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_22680 |
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| Symbol | |
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| ID | 8396157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2511898 |
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| End bp | 2513127 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644987016 |
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| Product | arabinose efflux permease family protein |
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| Protein accession | YP_003144627 |
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| Protein GI | 257064955 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.466156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.68733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCTTA TTGTCGAACA GAAACGTCTC GGACCGCGGA CATTCTTGGC ATGTCTGCTG
CTCATCCATA TATTCCTTAT CTTGGCTGAA GACATGTACG CCCCTGCGCT TTCCAGCATG
ATGAGGGAGT TCTCGGTGTC GGCGGCGCTT TTGAACATGA CCATGTTCGC GTTCTTCTTC
ACGATGGCGT TCGGCATTAT CGTCTTCGGG CCGATCAGCG ACCGGCTGGG GCGCCGGAAG
GTCCTTATCG GGTGCTGCGT GCTGTTCGCC ATCTGCTCGG CCGGCTGCGC CGCTTCGCCC
AGCGTGGCGG TGCTCACGGC GTTTCGGGTG GGGCAGGCCA TCGGCTACGG CGGCGTGGTC
ACGTTGGTGA CGGCCATGGT GGGCGACGCG TACGATATCG AAGGCACGAA GGTTGCCATG
ACGCTGCTGC AGTCCACCAT CATCATCGGG CCGACCGTGG CACCTTTCCT CGGAACGTTC
TTGATGGCGC ATTGGGGATG GCGCAGTATC TTCGTGCTCT TGGCGGTGCT GAGCGTTATC
AGCGTGGGCC TCGCGATGCT CATCGACGAG ACACTGCCCG AGCAATCCAG GTCATCTGTT
TCGGGCTCGG CGGTGCTCCA CGAGATGCTC GGCGGCTTCA AGACGCTGAT GGGCCAGAAG
ACGTTCCGGA ACCTGGCGCT GTTCATGTCC GTCGCAGGCG TGCCGTACTA CGCGTTCATC
GCCACGGCAT CCTATGTGCT ACTGGACTTC TTCACGGTGT CGTATCTCGA ATACAGCCTG
GTGTACGCGG CGGTGTCCGC TGTAAGCATC GTGGCCCCGT ACGCGTACCT GGTCCTATCC
AGGTATCTGA AATCCAGAAG CATCCTGGTG GTGTGCGTGG TGCTCATGGG CATGGCCTTC
GTGATCATGG CCCTTTGGGG GCAGAACGGG CCGTGGGTGT TCTTCGCGGC GTTGGTGCCC
TTCGCTCTGT CGGAAGGCAT TGCCCGCCCG CTGGCGTTCG TCATCCTGCT CCGCCAGCCG
CCCGAGCTGG TGGGTTCGGC CTCGTCGTTG GCGAATTTCC TGTACTCGGT TCTCACGTCG
TTGGGGACGG TTGTCGCCAC GGCGGGATGG TCGAACTTCG TGCTGGCCAA CGCCGTCATC
ATGGGCGTGT CGTTCGCAGC GATGGCAGCC CTGTATCTTG TAAACCTCCG GCGGGCCCAC
CTGGACGCTG CGGACCAAGC CAAAGTCTAA
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| Protein sequence | MHLIVEQKRL GPRTFLACLL LIHIFLILAE DMYAPALSSM MREFSVSAAL LNMTMFAFFF
TMAFGIIVFG PISDRLGRRK VLIGCCVLFA ICSAGCAASP SVAVLTAFRV GQAIGYGGVV
TLVTAMVGDA YDIEGTKVAM TLLQSTIIIG PTVAPFLGTF LMAHWGWRSI FVLLAVLSVI
SVGLAMLIDE TLPEQSRSSV SGSAVLHEML GGFKTLMGQK TFRNLALFMS VAGVPYYAFI
ATASYVLLDF FTVSYLEYSL VYAAVSAVSI VAPYAYLVLS RYLKSRSILV VCVVLMGMAF
VIMALWGQNG PWVFFAALVP FALSEGIARP LAFVILLRQP PELVGSASSL ANFLYSVLTS
LGTVVATAGW SNFVLANAVI MGVSFAAMAA LYLVNLRRAH LDAADQAKV
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