Gene Shel_22620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22620 
Symbol 
ID8396151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2505662 
End bp2506423 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content61% 
IMG OID644987010 
Producthypothetical protein 
Protein accessionYP_003144621 
Protein GI257064949 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACGA TCAAGAATTT CCTCCAGAAC GACGACGTGA CCGTCCTTTC CCAAATGGGA 
GCGTTCAGCG TCATCGAGTG GAAGCGCGAC CTTTCCCTCA CTCCCGAAAC CGTCCAGAAC
GCCTGGTTCT GTTCCGAGAT GAACGTTCGC CGTCGTCAGG TGGTCGTTGA CCTGAAGCAG
GCCCCTGTCA CCATCCAGGC CGGAGCCATG CAGTGGATGG TCGGAGACGT GTACAACGAC
ACGGGAGTCA AGGGCGCAGG CGATTTCCTC GGCAAGGCCC TGCGCGGCGC TGTGACCAAC
GAGTCGGCCA TCAAGCCTGA GTACAAGGGC ACGGGCACCC TGGTCCTGGA GCCCACCTAC
AAGTACATCA TCCTTCTGGA CGTCGCCCAG TGGGGTAACA ACATCGTGCT GGACGACGGC
CTGTTCTTGG CATGCTATTC CAGCCTGAAG CATACCGCGG TCATGCGCTC CAACATCTCT
TCGGCAGCCG CCGGCGGCGA AGGCCTGTTC AACCTGGCCA TCCAGGGCTT CGGCGCGCTG
TGCCTCGAGT CGCCCTGCCC GCAGGAAGAG CTCATCGAAA TCGAACTGAA CGACGACGTT
CTGAAGATCG ACGGCAATAT GGCGCTGGCC TGGAGCGGAT CGTTGCAGTT CACCGTCGAG
CGCTCCAGCA AGAGCCTTAT CGGCTCCGCA GCATCCGGCG AAGGCCTGGT CAACGTCTAT
CGCGGTACCG GCAAGGTCCT GATGGCGCCC ACCTCTCGCT AA
 
Protein sequence
MYTIKNFLQN DDVTVLSQMG AFSVIEWKRD LSLTPETVQN AWFCSEMNVR RRQVVVDLKQ 
APVTIQAGAM QWMVGDVYND TGVKGAGDFL GKALRGAVTN ESAIKPEYKG TGTLVLEPTY
KYIILLDVAQ WGNNIVLDDG LFLACYSSLK HTAVMRSNIS SAAAGGEGLF NLAIQGFGAL
CLESPCPQEE LIEIELNDDV LKIDGNMALA WSGSLQFTVE RSSKSLIGSA ASGEGLVNVY
RGTGKVLMAP TSR