Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22590 |
Symbol | |
ID | 8396148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2501720 |
End bp | 2502703 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644987007 |
Product | hypothetical protein |
Protein accession | YP_003144618 |
Protein GI | 257064946 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.322495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA TCGGCAAACG CATGAAAATT CTGTACCTCA TGCGCATATT CAACGAGGAG ACAGACGAGG CCGTCGGGTT GACCATGCCT CAGATCATCG GGCGTCTCTC CGAAATGGGT ATTTCGGCGG AACGCAAGGC CGTCTATCGC GATATCGAGG CTTTGCGCCA GTTCGGCATG GATATCCGCG TCTTCCAACG GGCTCCTGTG GAATATGCCT TGGTGAATCG CCGGTTCAGC CTGCCCGAGC TCCTGCTTAT GACGGATGCC GTCCAGAGCT CCCGTTTCTT GACCAAGGGC AAGTCGGAGG ATCTGGTCCG TTCCATCAAG ACCTTGGCGT CGAAGCGCGA GGCGAAAAGC CTGAGCAAGC GCATGCACGT CGAGGGCCGT ATCAAGATGC AGAACGAGAG CGTGTACCAC AACGTCGACA TCATCCAGGA GGCGCTTCGC CTGAAGCGCA AGGTGGAGTT CCAGTACTAC AAGTACGACC TTGAGAAGAA CAAGAAGCTG CAGCACGACG GCATGGTCTA TATGGAGACG CCGGTGCAGC TCATCTATTC GGACGGATAT TATTATCTGG TCGTTTACAA CGACAAGCAC ACGAACTTCA CCAACTACCG GGTAGACCGC ATGGTCGAGG TGAGGATTTC CGAGGAGCGC GCCACCCGCA ACGCCGACAT CGCCACCTTC GACGTGACAG AATACGAATC GCGTGCGTTC GGCATGTACC GGGGCGAAGC GATCTCGGTC GATCTTCTGG TGAAGGAAGA CGCCATGAGC GGCGTCATCG ATCGCTTCGG GAAGGATGTG CAGGTCACGC CCTACGACGA CGAGCATGCC AAGGTCCACG CCGTCGTGAT GGAAAGCCCC GTGTTCTACG GTTGGGTGGC CCAGTATGGC GACTCGATCC GCATCGTTCA GCCGAAGCGC CTGGTGGACG GCTATGTCGA CTACCTCAAG GGAATCATCG GCTCCTACGA ATAG
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Protein sequence | MTEIGKRMKI LYLMRIFNEE TDEAVGLTMP QIIGRLSEMG ISAERKAVYR DIEALRQFGM DIRVFQRAPV EYALVNRRFS LPELLLMTDA VQSSRFLTKG KSEDLVRSIK TLASKREAKS LSKRMHVEGR IKMQNESVYH NVDIIQEALR LKRKVEFQYY KYDLEKNKKL QHDGMVYMET PVQLIYSDGY YYLVVYNDKH TNFTNYRVDR MVEVRISEER ATRNADIATF DVTEYESRAF GMYRGEAISV DLLVKEDAMS GVIDRFGKDV QVTPYDDEHA KVHAVVMESP VFYGWVAQYG DSIRIVQPKR LVDGYVDYLK GIIGSYE
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