Gene Shel_22590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22590 
Symbol 
ID8396148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2501720 
End bp2502703 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content57% 
IMG OID644987007 
Producthypothetical protein 
Protein accessionYP_003144618 
Protein GI257064946 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.322495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA TCGGCAAACG CATGAAAATT CTGTACCTCA TGCGCATATT CAACGAGGAG 
ACAGACGAGG CCGTCGGGTT GACCATGCCT CAGATCATCG GGCGTCTCTC CGAAATGGGT
ATTTCGGCGG AACGCAAGGC CGTCTATCGC GATATCGAGG CTTTGCGCCA GTTCGGCATG
GATATCCGCG TCTTCCAACG GGCTCCTGTG GAATATGCCT TGGTGAATCG CCGGTTCAGC
CTGCCCGAGC TCCTGCTTAT GACGGATGCC GTCCAGAGCT CCCGTTTCTT GACCAAGGGC
AAGTCGGAGG ATCTGGTCCG TTCCATCAAG ACCTTGGCGT CGAAGCGCGA GGCGAAAAGC
CTGAGCAAGC GCATGCACGT CGAGGGCCGT ATCAAGATGC AGAACGAGAG CGTGTACCAC
AACGTCGACA TCATCCAGGA GGCGCTTCGC CTGAAGCGCA AGGTGGAGTT CCAGTACTAC
AAGTACGACC TTGAGAAGAA CAAGAAGCTG CAGCACGACG GCATGGTCTA TATGGAGACG
CCGGTGCAGC TCATCTATTC GGACGGATAT TATTATCTGG TCGTTTACAA CGACAAGCAC
ACGAACTTCA CCAACTACCG GGTAGACCGC ATGGTCGAGG TGAGGATTTC CGAGGAGCGC
GCCACCCGCA ACGCCGACAT CGCCACCTTC GACGTGACAG AATACGAATC GCGTGCGTTC
GGCATGTACC GGGGCGAAGC GATCTCGGTC GATCTTCTGG TGAAGGAAGA CGCCATGAGC
GGCGTCATCG ATCGCTTCGG GAAGGATGTG CAGGTCACGC CCTACGACGA CGAGCATGCC
AAGGTCCACG CCGTCGTGAT GGAAAGCCCC GTGTTCTACG GTTGGGTGGC CCAGTATGGC
GACTCGATCC GCATCGTTCA GCCGAAGCGC CTGGTGGACG GCTATGTCGA CTACCTCAAG
GGAATCATCG GCTCCTACGA ATAG
 
Protein sequence
MTEIGKRMKI LYLMRIFNEE TDEAVGLTMP QIIGRLSEMG ISAERKAVYR DIEALRQFGM 
DIRVFQRAPV EYALVNRRFS LPELLLMTDA VQSSRFLTKG KSEDLVRSIK TLASKREAKS
LSKRMHVEGR IKMQNESVYH NVDIIQEALR LKRKVEFQYY KYDLEKNKKL QHDGMVYMET
PVQLIYSDGY YYLVVYNDKH TNFTNYRVDR MVEVRISEER ATRNADIATF DVTEYESRAF
GMYRGEAISV DLLVKEDAMS GVIDRFGKDV QVTPYDDEHA KVHAVVMESP VFYGWVAQYG
DSIRIVQPKR LVDGYVDYLK GIIGSYE