Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22530 |
Symbol | |
ID | 8396142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2495617 |
End bp | 2496804 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644987001 |
Product | hypothetical protein |
Protein accession | YP_003144612 |
Protein GI | 257064940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.576293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTGTT TGAACTGCGG AGCTGAATTG AAGGACGGCG CAGGCTTCTG CACGTCTTGC GGCAAACCCG TGCAGCCGGT GGGTCCGGCT GCGAATGCGG CCCAAACCCA GATTATGGAC AATGCGGCAT GGCGGCCTGA CACGACCGAG GTCATGCAGC CTGTCGACGG CGCGGGCGCG GCGGGTTCGG GAAGTGCCCA TTACGTCGAG GCCCCGCAGC CCGTGCCTCC CAAAAAGACG TCGAAGGGAT TGATCGCGGC GGTCGTCGTG GTGGCACTTG CGCTGGTGGG AATCCTGGCG GCCCTGGTGT TCGGCGGAGT GCTCGGCGCC GACGATGCGG ATAAGGACGC CGACAAGCAG GAGACCAAGG TGACCCAGAA GGCCGATGAG GTTAAGCCCG CCGAGGCGCT GGTGGGGAAC TGGAACGCCA CCAAGCTGGT CAACTCCGAC GGATCGGACG AGATTCCGGA GGCCGGTACG TACGTCATCA CGCTTGAAGA CGACGGCACA TGCAAGGCGA TGTTCGCCGG CACCGAGCAG AAAGGCACCT GGGAGGTTGA CGAAGACGGC AAGGGCTCGG TAGAAGTGGA CGGCAAAGCG GTTGATCTTG AGCTGGACGG CAAGAAGCTG ATCCTGTCTT CCGACGGGGA AGAAATCTGG TTTAAGACCG CCACTGACGA GGATATGGAG GCCGCAGCGG CCATGGTCGG TTCGGCGGCC GCATCGACCG CCAAAAGCGA CGACTCTTCG TCCGACACCG CCAAGAGCAC CGACGCAAGC ACCGATGCGA ACAGCGCTGA TTCCAAGGAT GATGAAGTGA CCGCCACGGT GACCTCTGAC GGAGGCTCCT CGAGCTCTTC CGACGGTTCC AGCAGCTCAT CCAGCAGTTC CAGCTCTTCG TCTGGCTATG TTCTGCCGGA CAGCAGTACC CACTATTACA CCCAGTCCGA GCTGTCGGGC TTAAGCGACT GGGAACTCTA CGTCGCCCGC AACGAGATCT ACGCCCGCCA TGGACGCGGA TTCCAAAACG AGGACCTGCG GTCGTACTTC AACAGCCAGA GCTGGTACAC GGAGGTGTAT TCGCCGTCCG AGTTCGACAG CATGGCCAGC CCGCTGAACG ACTGCGAGAA GGCCAACGCC GAAACCATCA AGTCGGTTGA GCAGGCTCGC GGTTCCAGCT ACCTGTAG
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Protein sequence | MYCLNCGAEL KDGAGFCTSC GKPVQPVGPA ANAAQTQIMD NAAWRPDTTE VMQPVDGAGA AGSGSAHYVE APQPVPPKKT SKGLIAAVVV VALALVGILA ALVFGGVLGA DDADKDADKQ ETKVTQKADE VKPAEALVGN WNATKLVNSD GSDEIPEAGT YVITLEDDGT CKAMFAGTEQ KGTWEVDEDG KGSVEVDGKA VDLELDGKKL ILSSDGEEIW FKTATDEDME AAAAMVGSAA ASTAKSDDSS SDTAKSTDAS TDANSADSKD DEVTATVTSD GGSSSSSDGS SSSSSSSSSS SGYVLPDSST HYYTQSELSG LSDWELYVAR NEIYARHGRG FQNEDLRSYF NSQSWYTEVY SPSEFDSMAS PLNDCEKANA ETIKSVEQAR GSSYL
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