| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_22490 |
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| Symbol | |
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| ID | 8396138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2491218 |
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| End bp | 2492456 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644986997 |
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| Product | beta-glucosidase-like glycosyl hydrolase |
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| Protein accession | YP_003144608 |
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| Protein GI | 257064936 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.796827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCGCC GCACGTTCGC GGCGGGGCTT GCTGGCATGG CGTCCTGCGC GGCGTTGGGA
ACGCTGACTG GATGCTCGCT GTTCGCCTCC GACGATGAGC CGAAGCATCG CGACAAGGAC
TCCTTCGACG TTGACGACAG CTCGTCGGAG GCGAAGGGTT CGGGCGGCGA GCCCATGGAA
AAACCTGCCA AAACCTTGGA CGACGAGATT ACCGAGGAGA TTGCAGGCTG GAACATCGAG
CAGAAGGTGG CCCAGCTGTT CTTCGTGCGG CCCGAGTCGT TCACCGGAAT GGGCCAGGTC
ACAGCGGCAG GGGATACCAG CCGCACCGCC TATGGCACCT ATCCGGTAGG CGGCATCTGC
TACTTTGCGG AGAACCTGGT CGACCCTGCG CAGACCACCG AAATGCTCAC GAACATGGCC
CAGATCGGTG TGGATACGAT AGGGCATGCG CCGTTTCTGG CGGTTGACGA AGAGGGCGGC
ACCGTGACCC GCATCGCCTC GAACCCCGCC TTCGGCGTGA CGGACGTGGG GGACATGGCC
GCCATCGGAG ATACCGGGGA TGTATCGCAG GCGAAATCGG CGGCGCAGGC CATAGCCGGC
TACCTCAAGC CGCTCGGCTT CAACATGGAC TTCGCGCCGT GCTGCGACAT CGCCAACGTG
GAAGGCGGCG TCATGGCGCA GCGATCCTTC GGATCGGACC CCGAGCTTGT CTCCGACATG
GTGGAGGCCC AGATAGAAGG CTTCGTCGAG TCGGGTATGC TGTGCAGCGC CAAGCATTTC
CCAGGTATCG GGGCCGCCAT CGGCGACAGC CATGACGGCA GCATCTCCAT CGGCAGCACC
CTTGAGGAGC TGCAGGCAAC CGAGCTCGTT CCCTTCCAGC GCGCCGTTCA GGTGGGCGTG
CCTTTCGTCA TGGTGGGGCA TCTGTCGGTG CCGAACGTGA CGGGCGACGA CACGCCGGCC
TCCATTTCGA AGGTGATGGT GACCGACGTC CTGCGCGACC AGCTGCAATA CGACGGCATT
GTGGTGACGG ATTCCTTGGA GATGGGCGCC GTTACGGCCT ATGGGGATGC GGGTGCGGTC
ATGGCGTTGC AGGCCGGATG CGATATGGTG CTCATGCCGC TGGACTTCGC GGCGGCGTAC
AATGCGGTGT TGGCGGCGGT GTCCGACGGC ACGTTGAGTG AAGAGAGGAT TGACGAGTCT
TTGACCCGCA TCCTGCGTGT CAAGATGACG ATGGAATAG
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| Protein sequence | MSRRTFAAGL AGMASCAALG TLTGCSLFAS DDEPKHRDKD SFDVDDSSSE AKGSGGEPME
KPAKTLDDEI TEEIAGWNIE QKVAQLFFVR PESFTGMGQV TAAGDTSRTA YGTYPVGGIC
YFAENLVDPA QTTEMLTNMA QIGVDTIGHA PFLAVDEEGG TVTRIASNPA FGVTDVGDMA
AIGDTGDVSQ AKSAAQAIAG YLKPLGFNMD FAPCCDIANV EGGVMAQRSF GSDPELVSDM
VEAQIEGFVE SGMLCSAKHF PGIGAAIGDS HDGSISIGST LEELQATELV PFQRAVQVGV
PFVMVGHLSV PNVTGDDTPA SISKVMVTDV LRDQLQYDGI VVTDSLEMGA VTAYGDAGAV
MALQAGCDMV LMPLDFAAAY NAVLAAVSDG TLSEERIDES LTRILRVKMT ME
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