Gene Shel_22440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22440 
Symbol 
ID8396133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2486957 
End bp2487451 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content64% 
IMG OID644986992 
Producthypothetical protein 
Protein accessionYP_003144603 
Protein GI257064931 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTCA CACCCGAAGA GCAGTCGCGC TTCGACGCGC TGCTGGAACC CATCGTCGAA 
AACGACGCCG TCCAGAGCAT GAAGACCTTC GTGCAGCACG GCTCGGTAAG CACGTTCGAC
CACTGCCTGA CGGTGGCCCA GACGGCGTTT GTCCTGAACA GCCGCCTGCA TTTGGGCGGC
GACGAGTGCA TCGTGGTTCA CGGGGGCATG CTGCATGACC TGTTCCTTTA CGACTGGCAC
GATTCCCATT GGACCCACAG CTACAAGCAT GCGGAATACG CCCGGCGCAA TGCCGTGACG
CACCTGAACG CCGACGTGCG CGTGCAGGCC GTCATCCGCA CCCACATGTG GCCCATCGGC
ATAACGCACG TGCCCGTCTC CCGTGAGGCG TGGATCGTCT GCATGGCCGA CAAGATGGTC
TCGGCGCATG AGACCGTGCT CCAGCGGGCG GGCGGCAGCC CCTTCGCGAA GCGGGCCGAA
AGCAGAGCAC ACTAG
 
Protein sequence
MHLTPEEQSR FDALLEPIVE NDAVQSMKTF VQHGSVSTFD HCLTVAQTAF VLNSRLHLGG 
DECIVVHGGM LHDLFLYDWH DSHWTHSYKH AEYARRNAVT HLNADVRVQA VIRTHMWPIG
ITHVPVSREA WIVCMADKMV SAHETVLQRA GGSPFAKRAE SRAH