Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22230 |
Symbol | |
ID | 8396112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2461485 |
End bp | 2462048 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644986971 |
Product | transcriptional regulator |
Protein accession | YP_003144582 |
Protein GI | 257064910 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.158788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGAGC GAAAAGGAAC GAAGCAGCTT ATCGCCGAAT CCTTCGTCGA ATTGTTGGGT TCTGCGAAGA TCAAAGACAT CACGGTGGGG GACATTGCCA GGAACTGCGG CGTTTCCTCC CGTACCTTTT ATTACCATTT TGCGGATAAG TTCGAACTTG TCGAGTACGT GTATGAAATG CAGTTGAGGC AGGCGGCTCA ATCCTGGGGC GATTATCGCT CGCTGCTCTT GGGCAGCGTC GGCATCGTCG AATCCCTCGG CACATACGTC GAGCATTCGA CGGAATCTGT GCCCGGAGTC ATCCATCCGC TTGACAGAAT GGCGGATTGC TCCGTCCGCG TGTACCGCGA GATCATCGAG GAGCGGCTTG ACCCTGAGGT CCTGACTGAC AAAGTGCTGT TCGAGCTGTA TTACTACAAC TATCTGACGC TGAAGGCTTA CATGGATTGG ACCATATCGA GTAGCGGACG GTCTGGCGAA TGCCTCGTGG ACTACGTTCT CGCCTGCATG CCGCCCGATT TGGAACCCAT CCTGAACTGC GGCAAGGCCA CCGATTCGCA GTAG
|
Protein sequence | MIERKGTKQL IAESFVELLG SAKIKDITVG DIARNCGVSS RTFYYHFADK FELVEYVYEM QLRQAAQSWG DYRSLLLGSV GIVESLGTYV EHSTESVPGV IHPLDRMADC SVRVYREIIE ERLDPEVLTD KVLFELYYYN YLTLKAYMDW TISSSGRSGE CLVDYVLACM PPDLEPILNC GKATDSQ
|
| |