Gene Shel_22230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_22230 
Symbol 
ID8396112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2461485 
End bp2462048 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content54% 
IMG OID644986971 
Producttranscriptional regulator 
Protein accessionYP_003144582 
Protein GI257064910 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.158788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGC GAAAAGGAAC GAAGCAGCTT ATCGCCGAAT CCTTCGTCGA ATTGTTGGGT 
TCTGCGAAGA TCAAAGACAT CACGGTGGGG GACATTGCCA GGAACTGCGG CGTTTCCTCC
CGTACCTTTT ATTACCATTT TGCGGATAAG TTCGAACTTG TCGAGTACGT GTATGAAATG
CAGTTGAGGC AGGCGGCTCA ATCCTGGGGC GATTATCGCT CGCTGCTCTT GGGCAGCGTC
GGCATCGTCG AATCCCTCGG CACATACGTC GAGCATTCGA CGGAATCTGT GCCCGGAGTC
ATCCATCCGC TTGACAGAAT GGCGGATTGC TCCGTCCGCG TGTACCGCGA GATCATCGAG
GAGCGGCTTG ACCCTGAGGT CCTGACTGAC AAAGTGCTGT TCGAGCTGTA TTACTACAAC
TATCTGACGC TGAAGGCTTA CATGGATTGG ACCATATCGA GTAGCGGACG GTCTGGCGAA
TGCCTCGTGG ACTACGTTCT CGCCTGCATG CCGCCCGATT TGGAACCCAT CCTGAACTGC
GGCAAGGCCA CCGATTCGCA GTAG
 
Protein sequence
MIERKGTKQL IAESFVELLG SAKIKDITVG DIARNCGVSS RTFYYHFADK FELVEYVYEM 
QLRQAAQSWG DYRSLLLGSV GIVESLGTYV EHSTESVPGV IHPLDRMADC SVRVYREIIE
ERLDPEVLTD KVLFELYYYN YLTLKAYMDW TISSSGRSGE CLVDYVLACM PPDLEPILNC
GKATDSQ