| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21340 |
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| Symbol | |
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| ID | 8396023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2368611 |
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| End bp | 2369996 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644986882 |
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| Product | SNF family Na+-dependent transporter |
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| Protein accession | YP_003144493 |
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| Protein GI | 257064821 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0733] Na+-dependent transporters of the SNF family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00519934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAT CGAATCTCGA AAGCATGACC CGATCTTCAT GGTCGGGCAA ATGGGCGTTT
ATCCTCGCGG GTGCTGCAAG CGCCGTCGGT CTGGGCAACA TGTGGCGTTT TCCGTATTTG
GCGGCCAAAT ACGGCGGCGG CATGTTCCTG CTTACATATC TGGTGCTGGT GTTCACCTTC
GGCGTGTCCA TGCTCCTTTT GGAAATCACC TTGGGCCGCG CGTCGCGCCA GAGCGTCATC
GGCGCCTACG CGGCGTTCGA CAAACGCTGG AAGCCTCTGG GCTTTCTAGC GGCGGCGGTG
CCGTTCATCA TCACGCCGTA CTACTGCATC ATCGGTGGCT GGGTGGCCAA ATACGCCGCT
TCGTACGTGC TTGACAGCCC TGCGGACATC GCGTCGGAAT CGTTCTTCGG CTCCTTCATC
ACCAGCGAGT TCTCCAGTTT CTTCTGGATG CTGCTGTTCA TGGCGATTAC CTTCGTCGTG
GTTGCCTTGG GCGTCAAGCG CGGCATCGAG AAGGTGAACC TGGTGCTGAT GCCGGCCCTT
ATCCTGATGG CCATTCTGCT GTCGGCCTAC ACGCTGACGT TGCCGGGCGC CGTGGACGGC
CTGCTGTACT ACGTGAAGCC CGACTTCTCG AAGTTCTCCC CTGAGCTTCT GGTGGGCGCT
CTGGGGCAGA TGTTCTACAG CCTGTCGCTG GCCATGGGCA TCATGGTCAC GTACGGAAGC
TACCTGCTAC CGCACGAGGA CATCGTATCG TCGGCCACCC GTATCGGCGT GTTCGATGTG
GGCGTTTCCT TCCTGGCGGG CCTCATGATC GTACCGACGT CCTTCGTGGC GTTGGGAAGC
GGCGAGGCCG TAGCCGCCAA GGCGGGCCCC AGCCTCATGT TCGGCACCCT GCCTACGCTG
TTCGAAAGCT TGGGCGCTAT GGCGCCTGTC GTGGGCTGCG TGTTCTTCCT TCTGGTGTTG
TTTGCCGCAT TGACCAGCGC AATCTCGCTT ACCGAGGCCT GCGTGTCCAT CGTGTCCGAC
GGCACCGGTT GGAGCCGCAG GAAATGCTTC ATCATCACGG TGGCGGTCAT GGTCATCGTC
GGAATCTTCG TGAACCTGGG TTACAACCGC CTGAGCTTCA TCGAGCCGCT GGGCGATGGC
TCGACGCTTT TGGATCTGTT CGACTTCGTG TCCAACGTCG TGCTGATGCC CATCGTGGCG
CTGGGGACCT GCATCTTCGT GGGTTGGGTC ATCAAGCCCA AGGTGCTTAT CGACGAGATG
AAGGAAGGCA GCGCCCTGAA GGCTGAAAAG GCATGGGTCG CCATGATCAA ATTCATCGCG
CCGGTTCTGA TCGTCATCAT CCTGGTTTCG TACGTGGCCG CGCAGTTCGG GTTCGTCAGT
TTCTAG
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| Protein sequence | MAESNLESMT RSSWSGKWAF ILAGAASAVG LGNMWRFPYL AAKYGGGMFL LTYLVLVFTF
GVSMLLLEIT LGRASRQSVI GAYAAFDKRW KPLGFLAAAV PFIITPYYCI IGGWVAKYAA
SYVLDSPADI ASESFFGSFI TSEFSSFFWM LLFMAITFVV VALGVKRGIE KVNLVLMPAL
ILMAILLSAY TLTLPGAVDG LLYYVKPDFS KFSPELLVGA LGQMFYSLSL AMGIMVTYGS
YLLPHEDIVS SATRIGVFDV GVSFLAGLMI VPTSFVALGS GEAVAAKAGP SLMFGTLPTL
FESLGAMAPV VGCVFFLLVL FAALTSAISL TEACVSIVSD GTGWSRRKCF IITVAVMVIV
GIFVNLGYNR LSFIEPLGDG STLLDLFDFV SNVVLMPIVA LGTCIFVGWV IKPKVLIDEM
KEGSALKAEK AWVAMIKFIA PVLIVIILVS YVAAQFGFVS F
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