Gene Shel_21250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21250 
Symbol 
ID8396014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2359784 
End bp2360224 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content64% 
IMG OID644986873 
Producthypothetical protein 
Protein accessionYP_003144484 
Protein GI257064812 
COG category[S] Function unknown 
COG ID[COG5341] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCA AGGTGAACAC AACGACGGCC ATCGCGATCG CCGTCATAGC CGCCGTTCTG 
GTGGGTTCTT TCGTGGTCGT CGGCATGATG CTGGGCGGCG GCTCGGACGG CGAGCTGGTC
GCCATGGTGC ACGACTCCGA CGGCAACGTG TACGAGATGC CGCTGGACAC CGACGACACC
CTGGAAGTGA CCACTGACCT GGGCACGAAC GTCGTCGTGG TGCAGGACGG CGAAGTGTAC
ATGGATGACG CCGACTGCGA CGGCCACGAC TGCATGCGCC AGGGAAGCGT TTCTGCGCCA
GGCCGCCAGA TCATCTGTCT TCCCCATAAA CTGTGGATCG AAGTGGTCCG ATCCGGCGAA
AGCGGCGGCT CCATGGACGT GGAGGCCGTA GCCGGTTCTG ATTCCGAGGC CGACGAGGAC
TTAGACGTGG TGGCCCGCTA G
 
Protein sequence
MAGKVNTTTA IAIAVIAAVL VGSFVVVGMM LGGGSDGELV AMVHDSDGNV YEMPLDTDDT 
LEVTTDLGTN VVVVQDGEVY MDDADCDGHD CMRQGSVSAP GRQIICLPHK LWIEVVRSGE
SGGSMDVEAV AGSDSEADED LDVVAR