Gene Shel_21160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21160 
Symbol 
ID8396005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2345776 
End bp2346540 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content63% 
IMG OID644986865 
Producthypothetical protein 
Protein accessionYP_003144476 
Protein GI257064804 
COG category[S] Function unknown 
COG ID[COG2014] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTTGGG AGCTGTATGA CGCGCTGATC GACGGCATTC CCGAAGGCAT TGCCGTCAAA 
GACTTCTGCA AAGGCGTGAG CTGGTCGTAT GTTGAAGCGG AATGCGGACT CGGCATTGCC
AAGACCGTGC AGGACGGTGC CCGTGCGCAG CTCTACACCG GCAACTACCT GAATTTGGAC
CTGAAAAGCC TGGCCGCTTT GGCGAAGTCC TGGCGGTTCA GCGAAGCGTC CTTGGGCGTC
GCAGCCATGA ACGCCTGGTA CACCCAGCCT GACAAGCTGG CGGCCTTAGG GGCCGATGTG
GACGGCGGCG AATCCTACGC GGGTCGGAAC CAGAACCCCT TCGACTCCAT GGAGGAGCGC
TACACCGGCA AAAAGATCGC CGTCATCGGC CACTTCCCGG GCATGGCGAC CATGGACCGG
GTGGGGCATC TGACGGTGCT CGAGCGCAAC TGCCGAAACG ACAACGACGT GCCCGATTCG
GCCTGCGAAT ACATCCTGCC TGATCAGGAC TTCGTGTTCT TGACGGGCAC CACGCTCACG
AACAAGACCA TGCCGCGCCT GCTGGAGCTT TCCCGCAGCG CCTGCACCGT GGTGGCGGGC
CCCAGCTCGC TTCCTGCCTG GCCCGTCGTC GAGGCGGGAG CCGATATTGT CGCCGGCAGT
GTGGTGACCG ATGCCCAGGC TGCCAAGTAT GCGGTTCGCG GCGGCTCCAA GCAGCAATGG
CGTGCCGGCA TCAAAAAGTT CGTGTGGGAA CCGGTTCGCG GGTGA
 
Protein sequence
MGWELYDALI DGIPEGIAVK DFCKGVSWSY VEAECGLGIA KTVQDGARAQ LYTGNYLNLD 
LKSLAALAKS WRFSEASLGV AAMNAWYTQP DKLAALGADV DGGESYAGRN QNPFDSMEER
YTGKKIAVIG HFPGMATMDR VGHLTVLERN CRNDNDVPDS ACEYILPDQD FVFLTGTTLT
NKTMPRLLEL SRSACTVVAG PSSLPAWPVV EAGADIVAGS VVTDAQAAKY AVRGGSKQQW
RAGIKKFVWE PVRG