| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_20630 |
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| Symbol | |
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| ID | 8395952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2290459 |
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| End bp | 2291835 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644986812 |
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| Product | hypothetical protein |
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| Protein accession | YP_003144424 |
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| Protein GI | 257064752 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.548267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTGG AGGGCGAAAA CGTCCTGTCG CTGCCGTGGC TTGCATGCGC TTCAACTGCC
CAGGAGTGTC GAGATACGTG CGGGCGAAAC CCTCAAGCGA CGGAGGCATG GGTAGTCTCC
TGCGACGACA TGTCGCCGAT CAACCTGGCC GCTGCGTTGA AGCGCGACAA CCCCGCCCGT
TCGGTCCGAC TGGTCTCATT CGAGCAGAAC GGATCGCTGG CCAGCCGCGC AAGCGCCGCA
GGAATCGACA CGTTGTACGA CGAGAGGGCG TTTGCTACGG CCTATGCCAC GGTGAAGAAG
CGTGCGATGC TGCTGGCTCC GGCTGCCAAG ACGACAGTGA TTCCATCCGT GTCTGCCCAG
ATGCCTAAAC AGCAGCGGGT CGTTCAGGCC CCGCCGTCGG AGCCAGCGGT CAAGGTGTCG
CAGCCCGCAA CGAAATCCGC ATCCGGAAGT CAAAGCCGCG TTCCCCTTGT TACCGGGACG
GCAAGCGTGC GGCCTCCCGC CAAGGTCGCG CCGCAGCCAT CGGGGCGTCT CATGCCTCCG
GTGAAGTGGC CTCAGATAGC GCCTCCTGCC GGGGTGGAAG CTGGAACCGT GGTGTCTGTC
GTGTCGGCAA GCGGGGGATG CGGGAAGAGC TCGTTCGCGG CGGTGTTTGC CCTGCGGTGT
TGCAGGCGCG GGCTGTCCGT GGCGGTGGTC GATGCCGATT TGCAGTTTGG GGACATGGCC
TATCTCCTGG GGGCGAAGAA ACCTCTGGGC ATGGACGAGG CTGCCTTGCA TCCGCATTCG
GTTTCTGCGC TTTCCAGCGA CAAGGGATCG GGCCGTCCGG TGGTTATTGC GCCGCCTGAG
CGTGTAGAAG ATTCCGAATG GGCAGCCGCA GCGCTGGTGC CTATCATCCG CACGCTCCAG
AAGACGTTCG ACGTGGTGCT CGTCAATACC GGAGCATTCT GGAACGACGT CCAGCCTCAA
ATCATAGAGG CTTCCGACGC GGTGCTGTTC ATGCTGGGAC AGCGGACGTC ATCGCTGCGG
GCAACCGTGC GCGCGGTGGA ACTGTGCACC CGCATGGGGC TTGCCACCAG CTCGTTCGTG
TTCCTCATTG GAAGGTATAC GCGCACGGGC ATGGTATCCA CGGTGGATGT GTCCTGCGCA
TTGCGCGGAG CCAAGGCAAT GCCCGTTGGT GACGGCGGCC GAGAGGTTGA GGAGTTGCTG
GATTCGGGGT ACGCCGATGA GCTTGCTCGT TCCAAGAACC CACTCTGCTC GGCAGCAGAC
GATGCCATCA CGGCCGTGGT GCCGGCGCTC GGCGGGCATG CCGAGGAGAA GGGCAAGGCT
GGCAAGCGTC AGCATAGGAA ATGGTTTGGA AGGAGGGAAT CGAGTGGGAC TGTATGA
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| Protein sequence | MGLEGENVLS LPWLACASTA QECRDTCGRN PQATEAWVVS CDDMSPINLA AALKRDNPAR
SVRLVSFEQN GSLASRASAA GIDTLYDERA FATAYATVKK RAMLLAPAAK TTVIPSVSAQ
MPKQQRVVQA PPSEPAVKVS QPATKSASGS QSRVPLVTGT ASVRPPAKVA PQPSGRLMPP
VKWPQIAPPA GVEAGTVVSV VSASGGCGKS SFAAVFALRC CRRGLSVAVV DADLQFGDMA
YLLGAKKPLG MDEAALHPHS VSALSSDKGS GRPVVIAPPE RVEDSEWAAA ALVPIIRTLQ
KTFDVVLVNT GAFWNDVQPQ IIEASDAVLF MLGQRTSSLR ATVRAVELCT RMGLATSSFV
FLIGRYTRTG MVSTVDVSCA LRGAKAMPVG DGGREVEELL DSGYADELAR SKNPLCSAAD
DAITAVVPAL GGHAEEKGKA GKRQHRKWFG RRESSGTV
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