Gene Shel_20420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20420 
Symbol 
ID8395931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2271908 
End bp2272825 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content61% 
IMG OID644986791 
ProductDNA adenine methylase Dam 
Protein accessionYP_003144403 
Protein GI257064731 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.180762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAGA GCGGATGCCC GGTTGCCGAG ATTCTCGCTA CGACGGGGTT GTCGCAAGGC 
ACGTACTACG CGTACCTGCA TGCTTATTCG GACAGCGTCG ATTGGGCGTA CACGAACCAG
GACATCCCTC CGATGCTCAC GTGGCCGGGC TCGAAACGCG GAGAACTGGA TGAGTTGGTG
CCGCACGTGC CATCGTACCG GGGCAAGTAC GTCGAGCCGT TCCTCGGCGG GGCCAGTATG
TTCTTCGCGC TGAAACCGCA TCGGGCGCTG CTGTCGGACG CGTTACCGGA ACTGGTCGCG
TTCTACGGTG CCGTCAAGAA ACGGTACCGT AGGCTGCATG GCGAGTTGTC GAGGCTGCAG
GCCGAGTTCG ACGCGGCCGA CGACGATGGC AAGCGTGCGC TCTATGACAG GATGAGGGAC
GTCCTCAACG GCAAGGTCGT CGGCGACACG TCGACCGAGG CGGCGTTCTA TTTCGTGAGC
AAGACGTCGT TTTCCGGGTT GATACGGCGA AACAGGCGCG GCGAGTACAA CGTGCCGTAC
GGGCGCGGCA AGGCGTTCCG GGCGGACGAC GTGACCGAGG TGCATGCTCG GGCGCTGGTG
GGAGCGGAAC TGCGGTGCTG CGACTTCGAG GAGACGCTCA TGTGCTGCGA GCGCGATGAC
TTCGCGTTCC TAGACCCGCC ATATGATTCC GAGTTTGCGG ATTATGCTGG ATTGTTCGGT
GAGGAAGAGC ATCGAAGGCT GGCTACCGTG TTTCACGGGT TGCCATGCAA GGCGCTGCTC
GTCGTGAACC GCACGCCCTT GACGCTGTCG CTGTACGGTG ACGACATCGT TGGCGAGTAC
GTGCGCGAAT ACAACGTGAA CATACGTGGT CGAGTATCGT CGAGCAACGT TCATTTGATC
GTGGGGCACC TGTTGTAA
 
Protein sequence
MHESGCPVAE ILATTGLSQG TYYAYLHAYS DSVDWAYTNQ DIPPMLTWPG SKRGELDELV 
PHVPSYRGKY VEPFLGGASM FFALKPHRAL LSDALPELVA FYGAVKKRYR RLHGELSRLQ
AEFDAADDDG KRALYDRMRD VLNGKVVGDT STEAAFYFVS KTSFSGLIRR NRRGEYNVPY
GRGKAFRADD VTEVHARALV GAELRCCDFE ETLMCCERDD FAFLDPPYDS EFADYAGLFG
EEEHRRLATV FHGLPCKALL VVNRTPLTLS LYGDDIVGEY VREYNVNIRG RVSSSNVHLI
VGHLL