| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_20340 |
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| Symbol | |
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| ID | 8395923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2263525 |
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| End bp | 2264523 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644986784 |
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| Product | Flp pilus assembly protein TadB |
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| Protein accession | YP_003144396 |
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| Protein GI | 257064724 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.396755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.127493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAGGGG TCGTGTTCGC TGGTGCAGGC GTCGTAAGCG CGGCCTGTTC GGGCGCCGTG
CTCGCAGGGC TTGCCTATGC GTGGAGCGCA AAGGCCTGGT CGTCTGCCAA ATCCCAAGAT
GCCGGCGTGT ATACGTCAGG GGTGTCCTGG CGCGACAATG CCGAAAAGAT GGTTCGCTAC
CTGATGCGCA ACGGCTTGCC GTTGTTCGGC TTCGCGGCTC GCATGGTCAG GCGTTCCAGA
AAGGCGTCTC GGTATTTGGA GGGCGCTGTC CGGCTTTTGA TTCGCAAAGG ATACGCTGCA
AACGCCCAAA GCATCTGCGA ACTCATGTGC GCGCTTGCGG TTTTCGGGTT CGCGTTGGGA
TTAGCCGTCT CCGGTTCGCT GGTGGCTGCC CTGTGTCTTT CGGGCGGATG TGTATTCGCC
GTGGTTGCGG CGGGGTCGCA TGCTGCGGAT GAGGAACAGA ACCGTCTTCG AGAGCTGGTT
CCGGACGCAT TGCGGTGTAT GGAGTCGTGT TTCCAGGCGG GGTTGTCTTT GCCGCAGACC
TTCGCGGAAA CCGCCCGCGA AACCGAACCT CCGCTCAGCC AGACGTTCGC GCAGGTATCG
CACGATATCG AGCTCGGGCA TTCCGTTGAT GAGGCTCTCG ACCGGTTTCG GCTTGGCTCG
GGCCTTCCCG AGCTGGCGTT CGTCGCCGTC GCATTGGACG TGCAGTACGT GTCCGGCGGC
GACGCCACCT CTGTGCTGCG TATTGCGCAG GATTCGGTTG ACCACGCGCT CGAGCTGCGG
CGGACTTTGC GTGTACAGAC GGCTCAGGCG AAGCTTTCGG CGCAGATCGT CAGTGCCATG
CCGCTCGTGC TCGTGGGTGT GCTCTCGCTT GTTAGCCCCC ACTTCTTCAA CCCGTTTTTC
GAAACGGGGA CGGGTTTGGC ACTGCTGGCC ATGGCCGCAT CGATGTTGGC CGGTGGCATT
CTGATTGTCA GGAGGATGCT GGCTGTTGAT TTGGGGTGA
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| Protein sequence | MEGVVFAGAG VVSAACSGAV LAGLAYAWSA KAWSSAKSQD AGVYTSGVSW RDNAEKMVRY
LMRNGLPLFG FAARMVRRSR KASRYLEGAV RLLIRKGYAA NAQSICELMC ALAVFGFALG
LAVSGSLVAA LCLSGGCVFA VVAAGSHAAD EEQNRLRELV PDALRCMESC FQAGLSLPQT
FAETARETEP PLSQTFAQVS HDIELGHSVD EALDRFRLGS GLPELAFVAV ALDVQYVSGG
DATSVLRIAQ DSVDHALELR RTLRVQTAQA KLSAQIVSAM PLVLVGVLSL VSPHFFNPFF
ETGTGLALLA MAASMLAGGI LIVRRMLAVD LG
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