Gene Shel_19780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19780 
Symbol 
ID8395867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2209321 
End bp2209779 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID644986729 
Productconserved hypothetical nucleotide-binding protein 
Protein accessionYP_003144341 
Protein GI257064669 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0805781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGG AACTGGAAAG CGCATCCGTC GAGCAGACGC AAGAAATCGC ACAGCAGATT 
GCCCGTCTGG TTGAGCCTGG CGATGTCATC CTGCTCAACG GCGACCTCGG GGCGGGGAAG
ACCCATTTCA CGCAGGGGCT GGCTGCCGGA CTGGAAACGC CCACGGTGCC TACCAGTCCC
ACGTTCAACA TCATGTTCGT CTACGAGGGC GGCCGCCTGC CGCTGTACCA CTTCGATTTG
TACCGGCTTG AAGACGCCGA CGAACTTGAG GACATCGACT ACTACGGAAC CATCGAAGGC
GACGGCGTGT CGGTGGTGGA GTGGGCCGAC AAGTTCGAAG ACGCCCAGCC GGATGAATGC
CTTGCCATCA CCATCCGCAT TCTTCCTGAC CAGACTCGTG TTCTGAGTCT GGAGCCCTAC
GGCGGGCATT TCGAGGACAT CGTCGCCGCC ATCGCATAA
 
Protein sequence
MSLELESASV EQTQEIAQQI ARLVEPGDVI LLNGDLGAGK THFTQGLAAG LETPTVPTSP 
TFNIMFVYEG GRLPLYHFDL YRLEDADELE DIDYYGTIEG DGVSVVEWAD KFEDAQPDEC
LAITIRILPD QTRVLSLEPY GGHFEDIVAA IA