| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19580 |
|---|
| Symbol | |
|---|
| ID | 8395847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 2192774 |
|---|
| End bp | 2193442 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644986709 |
|---|
| Product | ABC-type metal ion transport system, permease component |
|---|
| Protein accession | YP_003144322 |
|---|
| Protein GI | 257064650 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000846519 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTTG CGAATTTCAC CTTCTACGAC ATCGTAACGA TCCTTGTGAT CCCGGCTTTT
GCCGCAACTG TGCGCATGGT GTTCATCTCG GGCATTCTGG CTACGATTTT CGGCTTCATC
ATCGGCGTCG TGCTTGTCGT CACCGAGAAG GGCGGCCTGT GCGAGAACGT CGTGGTCAAC
CGCATCCTCG ACGTCATCGT GAACATCGTC CGCTCGTTCC CGTTCATCAT CCTCATCGTG
TCCATCATCC CGCTGACACG ACTGATTGTA GGATCGTCGA TCGGCGAGGC CGCTGCCATC
GTGCCGCTGA CCATCGCGGC GTCGCCCTTC ATCGGGCGCA TCATCCAGAA CGCATTGAAA
GAGGTGGACC CGGCCCTCAT CGAGGCCGCC CAGTCCTTCG GCGCGTCCCG CCTGCAGATC
ATCGTGTCCG TCATGCTCAA GGAGTCGGTG CCGGCCATCG TGTCGGGCCT GATCCTGGCC
ATCATCAACC TGCTCGGCTG CACCGCCATG GCGGGCGCTG TGGGTGCGGG CGGCCTGGGC
GCCATTGCCC TGACCTACGG CTACCAGAAC TTCAACGACC AGGTCATGTA CACCATCTGC
GTGGTGCTCA TCATCCTGGT CGCCTTCATC CAGTACTTCG GCGAATGGAT CTACCGCAGG
CTGAAGTAA
|
|---|
| Protein sequence | MSLANFTFYD IVTILVIPAF AATVRMVFIS GILATIFGFI IGVVLVVTEK GGLCENVVVN
RILDVIVNIV RSFPFIILIV SIIPLTRLIV GSSIGEAAAI VPLTIAASPF IGRIIQNALK
EVDPALIEAA QSFGASRLQI IVSVMLKESV PAIVSGLILA IINLLGCTAM AGAVGAGGLG
AIALTYGYQN FNDQVMYTIC VVLIILVAFI QYFGEWIYRR LK
|
|---|
| |