| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_19530 |
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| Symbol | |
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| ID | 8395842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2186739 |
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| End bp | 2188067 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986704 |
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| Product | cell wall-associated hydrolase, invasion-associated protein |
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| Protein accession | YP_003144317 |
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| Protein GI | 257064645 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000946719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000162886 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCCATCA CGCTTCCGAA GGATGCATTT GCGGTAACGT CTGCTGACCT GCAGGCCCAG
GCAGATGCCG CTCGGGAAAA ACTCAATACC ATGATGATCG AACTCGGCCA GGCTTCGGAC
GCGTACAACC AGGCGCTCGA AGACTATGAC GCCGCTGTCG CAGGCATGGA TGAGACCCAG
CAGAAAATCG ACGACAACAA CGCCAGGATT GCCGACCTGC AACGCCGGTT GGCCCAGCGC
GCCCATGACA TGTACACGTC CGACCGCACG ACGTTTTTGG ACATCGTGCT AGGTTCGGCC
ACGTATGACG AGTTCATAAA GAACTGGGAT GCACTGAACT CCATGAACCA GCAGGACGCG
AATCTGGTCA TCGAGACGAA GTCGCTTCGA GTCGAGAACG AGATTCAGAA GGAAACGTAC
CAGCACCACG CCGACGAGGC GGAGGTGGCG CTTACTGAGG CCGATGAGGC TCGCGAGCAC
GCCGAGTCGC TGGTCGTGCA ATACCAGGCC GAGGTCAACG CTCTTGACGC CGAGGTGGCG
GAGCTTATCG CGCAGGAACA GGCCGCCGCT GCCGCAGCCG CCGCAGCGGC AGCCGACATG
GTCGACGAGA CCGACATGCC GGCAGCGGGG GAGGAACAGC CTGCAGAAGC CCCTGAAGAG
GGGGACGGCG GGTCGGATGC GTCCGTTGAC GAAGGGTCCG AATCCGACGG AGGATCCTCA
GCCGAGGAGG ACACGTCCAG CGGCTCTTCG GGATCGAGTG GTGCGTCTTC GTCCGGAGGC
TCAAGCTCCA GCTCCGGCTC CGGTTCCGGC TCAAGTTCAA GCTCGAGTTC CAGCTCAAGT
TCCAGGTCGA GTTCGTCTTC GTCAAGTTCA TCGGGCAGCT CGTCAGGCTC GTCGGGATCT
TCGGGCTCTT CCAGCTCTTC CGGAAGCAAT GTCACCACAC CATCATATTC GGGCGGATCG
GGCGGCGCGA ACAACTACGG ATCGGCCATT TTGGCCGTTG CCCAAAGCCA GCTTGGTGTT
GATTATGTGT TCGGCGCCAG CGAGCCTGGC GTGGGTTTCG ACTGCTCCGG CCTTACCAGC
TACTGCTGGT CGGTGGGCGC CGGCATCTGG ATCGGACGCA CGTCCGCATC CCAGTATGCC
AATGCCCAAT GGGTGGGGTT GCCAAGCCAA GCCCAGACAG GAGACGTGCT TTGGACCAGC
GGACATGTCG GAATCGCCGC CAACAGGGGA GGTTCGAGCT ACATCCATGC GCCGGTGCCG
GGCGATGTCG TGTCCTACAG CAGCACGGCG TCGTGGAACC CGTGGGTTGC GGCATTAAGA
TGGTATTAA
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| Protein sequence | MAITLPKDAF AVTSADLQAQ ADAAREKLNT MMIELGQASD AYNQALEDYD AAVAGMDETQ
QKIDDNNARI ADLQRRLAQR AHDMYTSDRT TFLDIVLGSA TYDEFIKNWD ALNSMNQQDA
NLVIETKSLR VENEIQKETY QHHADEAEVA LTEADEAREH AESLVVQYQA EVNALDAEVA
ELIAQEQAAA AAAAAAAADM VDETDMPAAG EEQPAEAPEE GDGGSDASVD EGSESDGGSS
AEEDTSSGSS GSSGASSSGG SSSSSGSGSG SSSSSSSSSS SRSSSSSSSS SGSSSGSSGS
SGSSSSSGSN VTTPSYSGGS GGANNYGSAI LAVAQSQLGV DYVFGASEPG VGFDCSGLTS
YCWSVGAGIW IGRTSASQYA NAQWVGLPSQ AQTGDVLWTS GHVGIAANRG GSSYIHAPVP
GDVVSYSSTA SWNPWVAALR WY
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