Gene Shel_19330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_19330 
Symbol 
ID8395822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2166501 
End bp2167229 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content59% 
IMG OID644986684 
Productpredicted divalent heavy-metal cations transporter 
Protein accessionYP_003144298 
Protein GI257064626 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00048073 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGGACTTG TCGTTACATT CATATTGGGG GCATTCGTAT TGGCGGGCGC CGCAATCGGC 
GCCTTCGCCA AAAACGAAGA GCTCATCCGG GAGGTATCCA TCGCCGTGGC ATTGGGTGCC
ATGGCCATGC TGCTCATCGA GGACCTTGTC CCTGAAGTCG TGGAAGAGGC CTCTGTCCTG
GGCTATCCGC TGATTGTCGT CGGTATCTCC CTCGGCGTGG CCGTCCTTGT GGTCCTCGAC
CGGTTTTTGC CCGATCACCA CCACGAGGCA GACCATAACG ACAGCGCCCT GCATATCGGC
CTAGCGACGG CCATCGCTCT CATCATCCAC AACATCGTCG AGGGCATGGG CGTATACAGC
GTGTCCATCG AATCGGCCAC GCTGTCGGTG CTTTTGGGCA TCGGCATCGG CATTCACAAC
ATCCCGATGG GCATGATTGT CTCCGCAGGC ATCCGCGACC AGTCGACGCC GCAAAAGATC
GCGGTCTTGG CTGCGGCGTC GCTTTCCACG TTTGTCGGCG GTCTGGTCAT GTTCACGCTG
AGCTCAGCAA TCGATGAGCG AATCGTCTTG TTTATGATCT GCTTGACCAT CGGCATGCTG
GGCTACATCA TCCTCTTCGA GCTCGTTCCG CATGTCGTGT GTTCCAAAAA CAAACCTATG
GCATTGCTCT GCATCGTCAT AGGCCTGGCC GCCGTGGCCG CCAGCGGGTT GCTCGAAGGC
CTGGCCTAA
 
Protein sequence
MGLVVTFILG AFVLAGAAIG AFAKNEELIR EVSIAVALGA MAMLLIEDLV PEVVEEASVL 
GYPLIVVGIS LGVAVLVVLD RFLPDHHHEA DHNDSALHIG LATAIALIIH NIVEGMGVYS
VSIESATLSV LLGIGIGIHN IPMGMIVSAG IRDQSTPQKI AVLAAASLST FVGGLVMFTL
SSAIDERIVL FMICLTIGML GYIILFELVP HVVCSKNKPM ALLCIVIGLA AVAASGLLEG
LA