Gene Shel_18830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18830 
Symbol 
ID8395772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2114243 
End bp2115073 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content55% 
IMG OID644986634 
Producthypothetical protein 
Protein accessionYP_003144248 
Protein GI257064576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.094328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA ATCCTGAAGA TCCCGTTCAG ATGGGCATGA TGGCCCTTGC CACTGCGGCA 
AACGAGTGCA ATCTCTCAAA TCCTCGTGAG GCGGAGCTCT CCCGCTTCCT CAAGAGCACG
CTGGATAGCA TGCAAGGCCA GCAGCACATG GTCGATGTGC TAAAGAAACT TTCAATCGGC
TTCAATGCCA TTATTAGCTC GCTCGACGGA AGCGCCGAAT GGCATGCGTT TATGATCGAT
GTCGCCAGCA CCATGTTTGA CGGCATTCAA GGGGCCTTGG TAGAGGCGGG CGAACCTCTC
ATAAGGAAAG CGCAGTTCGG TGACCCGCTA ACTTCGGAGA TAGCCTATAC CACCCCGTCC
GCCGACGATC CTGCCGTCGT GGCCAAGAGC CCATATACGA CGCCAGAGAA ACTCGCTGCT
CTTTCCGAAA GTGACGACTG GCAGATCCGG GCTGCTGTTG CCTCTAACCC TATCGCTCCT
GAAGTCCTTC TCCGGAAGCT GGCGACCGAC CAAGACGAAG GCGTTCGGTC ATATGCTGCA
CGAAACCAGT CAACACCGAT TGACGTGCTT GAAACGCTGG CAGCAGATCC TAGCGAGTAC
GTACGAGACT TCCTGGCGCA GAACCCGGCG ATTCCTGTTT CCCTGATGGA GAGGCTCGCG
AGCGACTCAC ACTGGAGACC TCGGTCAGGA ATAGCTGAAA ACCCCAATAC TCCAAAGTGG
TTGCTAAGCA AGTTGAGGAC CGACCCTGAC GCGCGAGTGA GGGACCTCGC GAGGCAAAAC
ATCTACGAAG GTGATAGCTC GAGCTTTTAT GACGAGGAGA TTCCGTTCTA G
 
Protein sequence
MSFNPEDPVQ MGMMALATAA NECNLSNPRE AELSRFLKST LDSMQGQQHM VDVLKKLSIG 
FNAIISSLDG SAEWHAFMID VASTMFDGIQ GALVEAGEPL IRKAQFGDPL TSEIAYTTPS
ADDPAVVAKS PYTTPEKLAA LSESDDWQIR AAVASNPIAP EVLLRKLATD QDEGVRSYAA
RNQSTPIDVL ETLAADPSEY VRDFLAQNPA IPVSLMERLA SDSHWRPRSG IAENPNTPKW
LLSKLRTDPD ARVRDLARQN IYEGDSSSFY DEEIPF