| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_18560 |
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| Symbol | |
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| ID | 8395745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2081554 |
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| End bp | 2083161 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644986608 |
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| Product | SEC-C motif domain protein |
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| Protein accession | YP_003144222 |
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| Protein GI | 257064550 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCTGG GCAGCCTGGC CCGCATGTGC GAACGGAGGT ACGACGCCAT GCTGGAAAAG
AACGACGGCT CGACCATTGA TTTTCTCTCC GCATCACGTG AAATTCAGAG CATGAAGCTC
GAAGGCGACG GCACCCGATG GAAAGCAGAC CCGCAACGCG AATACGGACG CTCCCGCAAG
ACCCCCTTCC CTCCGAGCGT GGGACTTCAC CGCGGGGCGC TAGCGGGACT CACTTGGGAA
GAGCGCGAGA AAGCCGTAAA GGAAAGCAGC GGTTGGGAAT CGTTTCGTTC TGAAATTGAT
TCGGCCATAC AATCGCACTA CGACACTGCC TGGAACGCAG CGCTTGACGA CGCGGTCCAT
CTTAAGCCTG TCGAAAGCAT CCAGGAGCTC ATGACCGAGA TGGGCGACAA GGGCGGCAGC
ATCTCCAAAA AAAGCTTTTT GGACAGCCTC TATCGCAGCC AGAACCCGCA GCTATCCGCG
ATGGGCGACG CCCTGAGCGA AAAGCCCGAC GAGTTCTTCG CCGACTTGGC CTTGAGCGCC
GCCCGAAGTT ATACCCTGGG CGATCTGACG AAGGATTTGG ACGCCGCCTA TCCTGAAGTT
TTCGACCTGA TGAAGCGTCT TGCCGCCTCG GGCTACCGCC TGGACTTCGA AAAGAGGCCG
GAAGCCTTCG CGCTGCGGGA AACCATCCAT GATGCCGCTC CGTTCGTCCG GAGCTTCAAC
CATGATGGCA CCCTTACTGT GATCCTGATG GAAGAATACC GCGACATCTT CGACGAGGTT
GATTGGGATG AGCAGGACAG ACGCCGAAGC GCTGTTGAGC ACGCGATTCA ATGCGCCGGG
TCGATGGCGT TCTTCTGCGG AATCGCCCCA GTCAGCGACG TGCACAAGCA GTTCCGCGCA
TGGTATCCGG ACGAAGACCT GTGGACCGAC GAATCGGATT TCCTCCAACT GCTGCATTCC
TTGTGCGTAC AACGCGACAT TGCGGATACA GGATTCGTCT GCAGCAAGAC CGGCGGGGAG
CTTCCGCCAT CAATCGTATC CTACGGCGTG ATGGAAGCCT GCGGCGCCTT CGACGAGAAC
ATGAGCGACC AGCAGATCGA AGACGAAATC GACGAGTACA TCGCCATTCT GACACCAAGG
CGCGAAACCG TCGGGTTCAA CGGGCTTCCC AATGGCGCCA AGGGCAAAGA TCCTTTCGAG
TACTGCTACG AGCTGCCGCA GGTACGACGT ATGGTCGCCT TCCTGGATGC GCACGTACCC
GACGACGATG ACGACTACGA GTACGCAGAC CGCACGACAG ACATGCTGCT GATGCTGACG
ATATCGAACC TCGGAAGCCC GCAGGATGTG TTGCGCACCG TTCTGGACAG CGAACTCGTC
GTAATCGAAA CGCAAGGCGA GCTCAGGGAG TTCAGCGATT GCTTCATGAC CATGTCGAAC
GCCCTCCCCT GTTGGATGAA CTACGGCCGG TCCGCTTACG ATCTGAACGA CCTCGCCACC
GGGCAGAAGT CGTTCTACGA CGAGTTCGGC CGCAAGATCA AGGTCGGACG CAACGACCCA
TGCCCGTGCG GAAGCGGAAA GAAGTACAAG AAGTGCTGCG GCAGATAG
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| Protein sequence | MQLGSLARMC ERRYDAMLEK NDGSTIDFLS ASREIQSMKL EGDGTRWKAD PQREYGRSRK
TPFPPSVGLH RGALAGLTWE EREKAVKESS GWESFRSEID SAIQSHYDTA WNAALDDAVH
LKPVESIQEL MTEMGDKGGS ISKKSFLDSL YRSQNPQLSA MGDALSEKPD EFFADLALSA
ARSYTLGDLT KDLDAAYPEV FDLMKRLAAS GYRLDFEKRP EAFALRETIH DAAPFVRSFN
HDGTLTVILM EEYRDIFDEV DWDEQDRRRS AVEHAIQCAG SMAFFCGIAP VSDVHKQFRA
WYPDEDLWTD ESDFLQLLHS LCVQRDIADT GFVCSKTGGE LPPSIVSYGV MEACGAFDEN
MSDQQIEDEI DEYIAILTPR RETVGFNGLP NGAKGKDPFE YCYELPQVRR MVAFLDAHVP
DDDDDYEYAD RTTDMLLMLT ISNLGSPQDV LRTVLDSELV VIETQGELRE FSDCFMTMSN
ALPCWMNYGR SAYDLNDLAT GQKSFYDEFG RKIKVGRNDP CPCGSGKKYK KCCGR
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