Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_18390 |
Symbol | |
ID | 8395729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2066659 |
End bp | 2067546 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986592 |
Product | nitroreductase |
Protein accession | YP_003144206 |
Protein GI | 257064534 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.281647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTCG AGTCGAAAAC GCTGTTCAAG GTGGACGTGG ACCGCTGCAT CCGCTGCGGG CGGTGCGTGA ACGTCTGCTC GGGCATGGTG CTCGAGCGAG GTCGGGACCA AACGCCGCAC ATGCTGCCCT TCGAACGCTT CGGCTGGAAA GGCTGTTGGC GGTGCGAGCA TTGCCTTGCC GTGTGCCCCG TGGGGGCCAT CTCGATATTC GGGAAGGACC CGTCCGACTC GTCGTCGCCC GCCCCGCCTG AGGCCGCCGA TCATCTGGAA CGGCTGGTGG CCAACCGCAG AACCTGCAGG CGCTACCTGG ACAAAGACGT GGACCCGACC ATCGTCGACA GCATTCTGGA CGCCATGCAG AACGTGCCCG CCGGCGGAAA CGCCCAAAAC ACCGAATACA CCGTGATCGA TTCGAAAGAA CGGATGGACC GCATTCGAGA AAGCGCCTAT GCCGCCATGG AGCAGGCGGC GGCAGAAGGC CGCTATACTT CGAGCTTCGA CGCGTTCTAT TACCGCAAGA TGAAACAGTC GGAGGCAACG GTGCGCAAAG GCGACCTGCT TTTCTGCGGA GCTCCGCACC TGTTCGTAGC GCACGCGAAG GCCACGGGCC GCTGGGCCGA CGATTACGCC GTCAACTGCA ATCTGGCCAC AGCCTATTTC GAGCTTTTGG CCAACGCCCA CGGCTTGGGC ACCGCCATCA TGAGCTATCC GTCCGACGTG CTCAACGAGC TTGCGCCCGA AGCTCGCGCC ATGCTTGGCA TTCCCGCCGA CCACTACATG AAGCCTGTCG TCGGGTTCGG TTACCCCGAG ATCCCCTATG CCCGCGGCGT GCGGAAAAAC CGCCGCAAAG TGCATCGGTG GTCGAAGTAC GCCGAATCGG GCATCTAA
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Protein sequence | MGVESKTLFK VDVDRCIRCG RCVNVCSGMV LERGRDQTPH MLPFERFGWK GCWRCEHCLA VCPVGAISIF GKDPSDSSSP APPEAADHLE RLVANRRTCR RYLDKDVDPT IVDSILDAMQ NVPAGGNAQN TEYTVIDSKE RMDRIRESAY AAMEQAAAEG RYTSSFDAFY YRKMKQSEAT VRKGDLLFCG APHLFVAHAK ATGRWADDYA VNCNLATAYF ELLANAHGLG TAIMSYPSDV LNELAPEARA MLGIPADHYM KPVVGFGYPE IPYARGVRKN RRKVHRWSKY AESGI
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