Gene Shel_18320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18320 
Symbol 
ID8395722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2060704 
End bp2061228 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content56% 
IMG OID644986585 
Productnitroreductase 
Protein accessionYP_003144199 
Protein GI257064527 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCT TGGAATTGGC AAAACGCAGG TATTCGGAAC GTTTCTTCGA CAGCAAGCCC 
ATTGAACAGG AGAAACTCGA CTTGATTCTG GAAGCGGGAC GCATCGCCCC GACCGCTGCC
AACTATCAAC CGCAACGGTT CTTCCTCATC CGCAGCGATG AAGCGCTCGC CAAGCTGAAG
ACCGTCACCA AATTCACCTT CAACGCCCCG ACGGTTATCC TCGTCTGCTA CGACGACGAT
GAGGCATGGG GCACCTTCAA CGACAGGCTC CATCCGAACT ACTGCTCCGG CGAGCAGGAT
GCGAGCATCG CTGCTGCAAA CATGATGTAC GAAGCCGAAA ATCTTGGCAT CCATACCCTC
TGGATCAGGG GGTTCGACTC CCAATCCGTC GTGGACACGT TCGAGCTGCC CGACACTATG
ATTCCCGTCA TGATGCTGGC GCTGGGCTAT CCGAACGACC GCGCGAAACC CAGCCAGGCC
CACTTCCAGA GGAAGCCCAT CGAAGACTTC GTGCTCGAAC TGTAA
 
Protein sequence
MEFLELAKRR YSERFFDSKP IEQEKLDLIL EAGRIAPTAA NYQPQRFFLI RSDEALAKLK 
TVTKFTFNAP TVILVCYDDD EAWGTFNDRL HPNYCSGEQD ASIAAANMMY EAENLGIHTL
WIRGFDSQSV VDTFELPDTM IPVMMLALGY PNDRAKPSQA HFQRKPIEDF VLEL