Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_18250 |
Symbol | |
ID | 8395715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2052095 |
End bp | 2052946 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644986578 |
Product | ABC-type Mn2+/Zn2+ transport system, permease component |
Protein accession | YP_003144192 |
Protein GI | 257064520 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCGT TTGCCCAACT GGCGGAATAC CTTAGCTACC CCTTCGTCGT GAACGCCATC ATCGTGGGCG CGCTTGTGGC CCTGTGCTCG TCGCTTCTGG GAACGACCCT CGTGATGAAA CGTCTCTCCT ACATCGGTGA CGGCCTGTCG CATGTGGCCT TCGGCGCTTA CGCCGTTGCT GCGGTTGCGG GCACCACGCG GGAAATGCTG TTCATCGCGC CGGTAACCGT CATCGCCGCC GTCCTGCTGC TGCGGCGCGG CCAGTCTTCC AAAGTGAAAG GAGATGCGGC GATCGCCATG ATGTCGGTTA CCGCCGTCGC CGCAGGTTAC CTGATCATGA ACGTGTTCGG CACAAAATCC AACGTGTCCG GAGACGTGTG CTCGACGCTG TTCGGCTCCA CTTCCATCCT CACGCTGACC GCCTTCGACG TGGGTGTGTG CGGCGTTATG TCCGTTGCCG TGGTGGGCGG TTTCGCACTG TTGTACAACC GTATTTTCGC GGTCACGTTC GACGAGGCGT TCTCCCAGGC CATCGGCCTG CCCGTAGCCC GATACAACCT GGCCGTCGCC ATCATGATCG CCTTCGTCAT CGTGGTGGGC ATGAATCTGG TTGGCGCGCT TCTGCTTTCC GCCCTTGTGG TGTTTCCGGC GCTGTCCGCC ATGCGGGTGT GCCGGACCTT CCGAAGCGTG ACCGCTCTGG CCGCCGCCAT CGGCGTGGTG TGCGCCCTTA TCGGCATTCT GGCATCCATC CTGTTCAGCA CGCCGGTCGG CTCCACCATC GTGCTGTTCG ACGCCGTCGC CTTCACCCTT TTCTGCCTGG TCGGAAAGCT GTCCGGAAGC AAAGCCGTAT AA
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Protein sequence | MSSFAQLAEY LSYPFVVNAI IVGALVALCS SLLGTTLVMK RLSYIGDGLS HVAFGAYAVA AVAGTTREML FIAPVTVIAA VLLLRRGQSS KVKGDAAIAM MSVTAVAAGY LIMNVFGTKS NVSGDVCSTL FGSTSILTLT AFDVGVCGVM SVAVVGGFAL LYNRIFAVTF DEAFSQAIGL PVARYNLAVA IMIAFVIVVG MNLVGALLLS ALVVFPALSA MRVCRTFRSV TALAAAIGVV CALIGILASI LFSTPVGSTI VLFDAVAFTL FCLVGKLSGS KAV
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