Gene Shel_17900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17900 
Symbol 
ID8395680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2022023 
End bp2022661 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content63% 
IMG OID644986544 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003144158 
Protein GI257064486 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.256689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAC CCATCGTAGA GCTTCAGGTG AAATCCGATG CCTACCGGCT GATCTCGCTG 
TTCCTGCACC TTCCCACGAA GGAGCTGTGG GCCGGCGTAG CCGACGGGTC CGTTGCCGCC
GACGCGCAGG CCATCGTCTC CGAGCTGGGC ATGGGCGAGG ACGCCGTTGC GGATATGGCG
GGCTTTGCAG ACGCGGGTGT TTCCCTAGAT GGTCTGCGTG CCGACTACAC GGCTCTCTAT
ACGAGTCCCA GCGGTCCGAA AGTTCCCATC TACGAGGCGA TTTTCCGCGA CCGCGACGAC
TTCGACACCA GCAAGCTCAC GTTCATATCC CCGAACGCAT TGAGCGCCGA GAGGTTCTAC
AGATCCTACG GCCTGAAGAT GGGCGGTACG GACAACAACT CCGCCGACCA TATGGCTGCC
GAATGCGAGT TCGCATCGTT TTTGCTAGCG GAACAGGCCT CCGCGGTCGA AGCCTGCGAC
GCGGCCCGCG CCCTAAAGGC AGCCGAGACC TGGTCGGACT TCCAGGTCAG GCACCTGGCC
AAATGGTCGG AGGCCTTCTT CGGGCGCAGC TTGGAGGCTG CTCGGACCCC TGCTTACCGG
GCCGTCGCCA AGTTGGGCGC GCTCCTGTCC CGCATGTGA
 
Protein sequence
MSEPIVELQV KSDAYRLISL FLHLPTKELW AGVADGSVAA DAQAIVSELG MGEDAVADMA 
GFADAGVSLD GLRADYTALY TSPSGPKVPI YEAIFRDRDD FDTSKLTFIS PNALSAERFY
RSYGLKMGGT DNNSADHMAA ECEFASFLLA EQASAVEACD AARALKAAET WSDFQVRHLA
KWSEAFFGRS LEAARTPAYR AVAKLGALLS RM