Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17900 |
Symbol | |
ID | 8395680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2022023 |
End bp | 2022661 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986544 |
Product | uncharacterized component of anaerobic dehydrogenase |
Protein accession | YP_003144158 |
Protein GI | 257064486 |
COG category | [R] General function prediction only |
COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.256689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAC CCATCGTAGA GCTTCAGGTG AAATCCGATG CCTACCGGCT GATCTCGCTG TTCCTGCACC TTCCCACGAA GGAGCTGTGG GCCGGCGTAG CCGACGGGTC CGTTGCCGCC GACGCGCAGG CCATCGTCTC CGAGCTGGGC ATGGGCGAGG ACGCCGTTGC GGATATGGCG GGCTTTGCAG ACGCGGGTGT TTCCCTAGAT GGTCTGCGTG CCGACTACAC GGCTCTCTAT ACGAGTCCCA GCGGTCCGAA AGTTCCCATC TACGAGGCGA TTTTCCGCGA CCGCGACGAC TTCGACACCA GCAAGCTCAC GTTCATATCC CCGAACGCAT TGAGCGCCGA GAGGTTCTAC AGATCCTACG GCCTGAAGAT GGGCGGTACG GACAACAACT CCGCCGACCA TATGGCTGCC GAATGCGAGT TCGCATCGTT TTTGCTAGCG GAACAGGCCT CCGCGGTCGA AGCCTGCGAC GCGGCCCGCG CCCTAAAGGC AGCCGAGACC TGGTCGGACT TCCAGGTCAG GCACCTGGCC AAATGGTCGG AGGCCTTCTT CGGGCGCAGC TTGGAGGCTG CTCGGACCCC TGCTTACCGG GCCGTCGCCA AGTTGGGCGC GCTCCTGTCC CGCATGTGA
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Protein sequence | MSEPIVELQV KSDAYRLISL FLHLPTKELW AGVADGSVAA DAQAIVSELG MGEDAVADMA GFADAGVSLD GLRADYTALY TSPSGPKVPI YEAIFRDRDD FDTSKLTFIS PNALSAERFY RSYGLKMGGT DNNSADHMAA ECEFASFLLA EQASAVEACD AARALKAAET WSDFQVRHLA KWSEAFFGRS LEAARTPAYR AVAKLGALLS RM
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