| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17190 |
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| Symbol | |
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| ID | 8395609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1941618 |
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| End bp | 1942805 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986473 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003144087 |
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| Protein GI | 257064415 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.479032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGACCT CCGAATTGCG TGCGATTGCC CAGGACTACG GCACGCCGTC CTACGTGTTC
GACCTGGAAG CGTTCCGCAA CCGTCTGCGC GAATGTCAGG CCATCGTCGG CCCCGAGGTG
CACCTGTGCT TCGCCATGAA GGCCAATCCC TGGCTCATCA ACGCCGCCGC CCAGGTGGCG
TCGAAGCTCG AGGTGTGCAG CCCGGGCGAG CTGGACCTGT GCGAACGCGC TAACATCAAC
CCTGATCAGA TTGTGTATTC AGGCGTCAAC AAGGAGATCT GCGACATCAC CCACGCCATC
GAGTACGGCG CAGGCGTCCT GACCGCAGAG TCGCTTCTGC ATGTCGAATA CATCGACCAG
GTGGCCCGCG AGCACAACCT GGTGGTCGAC GTGCTGCCGC GCCTGAACGC GGGTTCCCAG
TTCGGCATGT CCAAAGACGA GCTGCTGTGG CTGGTGGACA ACCGCGACCG GTTCCCGGGG
CTTAAGTTGG TCGGCATCCA TTACTTCGTA TACACCCAGC GTTTGAAACT CAAGCACCAG
CGCAAAGAGA TGGCTATGCT GAGCGACTTG ATCGATGAGC TTGCGAACGA GCACGATTTC
GTCGTTGAAC GTCTGGAATA CGGCCCTGGC CTGGGTGTTC CTTACTTCAT GGATGACGAC
TTCTCCGACG ACCTGCTGCC CATCCGCGAG ATTGCGGACG ACCTGCGTGC CCTGGCAGCA
AAGACCGAGC TGACCATCGA GATGGGCCGG TTCTTCGCTT CGCCGTGCGG TACGTATTTT
ACGAAGGCTA TGGACCTGAA GAGCAACAAG GGCACGAATT ACGCTATCCT TGACGGTGGT
ATGCACCACA TCACGTACTT CGGCCAGATG ATGGGCATGC ATGTGCCGCC GATCGTCAAC
CTGACCCGCG AAGCGGAAGA CCGCGAAAGC GAGGTTGCGG AATGGTGCCT GTGCGGCAGC
CTGTGCACCG TCAACGACGT GCTGGTACGT GCCGTGGAAC TGGACAGCCT GCAGCGCGGC
GACGTGCTGG CGTTCGGAAG GTGCGGCGCC TACGCCGTGA CCGAGGGCGT GTCGCTGTTC
CTGAGCCGGA GGCTGCCCCG CGTGTTGTTG CGCGAGGCGG ACGGTTCGGT GGTGCTTGCC
CGCGACTTTA TCGAGAGCAG CCAGTTCAAC GGCCTGGCCG TTGGGTAG
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| Protein sequence | METSELRAIA QDYGTPSYVF DLEAFRNRLR ECQAIVGPEV HLCFAMKANP WLINAAAQVA
SKLEVCSPGE LDLCERANIN PDQIVYSGVN KEICDITHAI EYGAGVLTAE SLLHVEYIDQ
VAREHNLVVD VLPRLNAGSQ FGMSKDELLW LVDNRDRFPG LKLVGIHYFV YTQRLKLKHQ
RKEMAMLSDL IDELANEHDF VVERLEYGPG LGVPYFMDDD FSDDLLPIRE IADDLRALAA
KTELTIEMGR FFASPCGTYF TKAMDLKSNK GTNYAILDGG MHHITYFGQM MGMHVPPIVN
LTREAEDRES EVAEWCLCGS LCTVNDVLVR AVELDSLQRG DVLAFGRCGA YAVTEGVSLF
LSRRLPRVLL READGSVVLA RDFIESSQFN GLAVG
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