Gene Shel_17140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17140 
Symbol 
ID8395604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1934802 
End bp1935200 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content59% 
IMG OID644986468 
ProductZn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
Protein accessionYP_003144082 
Protein GI257064410 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0851583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAGA TGGGTTTGGT CCATCCTTTG GTGGACATGG TGGTCGATTA CGCAGTGCAG 
GCGGGGGCCA GCGAAGTCAA GGCCGTGTAC GTGACGATCG GCGACGGACG CGACATCGTC
ATGGATCTGA TGGAAGGTCT CTTCAAGCAC CTTGTCCGCG GCACGCTTGC CGAAAACGCA
GAGCTGATCG TCGAGCATGT GCCGTACCGT GCCGAATGCA ACGAATGCCA GGGACATTTC
ACAATCAACC AATTCAAGCG GTCGACGTGG ACGTGCCCGC ATTGCGGGGC GGAGCGGAAG
TACCGCATCG TCTCCGGTTT GGAGTTCATG GTCAACCGGA TCGAAATCGT CAGGGGTACG
CAATTCGCGG ATCCCAACGC AACGCGAGGG GCAGCTTAG
 
Protein sequence
MHEMGLVHPL VDMVVDYAVQ AGASEVKAVY VTIGDGRDIV MDLMEGLFKH LVRGTLAENA 
ELIVEHVPYR AECNECQGHF TINQFKRSTW TCPHCGAERK YRIVSGLEFM VNRIEIVRGT
QFADPNATRG AA