Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17140 |
Symbol | |
ID | 8395604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1934802 |
End bp | 1935200 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644986468 |
Product | Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
Protein accession | YP_003144082 |
Protein GI | 257064410 |
COG category | [R] General function prediction only |
COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0851583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGAGA TGGGTTTGGT CCATCCTTTG GTGGACATGG TGGTCGATTA CGCAGTGCAG GCGGGGGCCA GCGAAGTCAA GGCCGTGTAC GTGACGATCG GCGACGGACG CGACATCGTC ATGGATCTGA TGGAAGGTCT CTTCAAGCAC CTTGTCCGCG GCACGCTTGC CGAAAACGCA GAGCTGATCG TCGAGCATGT GCCGTACCGT GCCGAATGCA ACGAATGCCA GGGACATTTC ACAATCAACC AATTCAAGCG GTCGACGTGG ACGTGCCCGC ATTGCGGGGC GGAGCGGAAG TACCGCATCG TCTCCGGTTT GGAGTTCATG GTCAACCGGA TCGAAATCGT CAGGGGTACG CAATTCGCGG ATCCCAACGC AACGCGAGGG GCAGCTTAG
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Protein sequence | MHEMGLVHPL VDMVVDYAVQ AGASEVKAVY VTIGDGRDIV MDLMEGLFKH LVRGTLAENA ELIVEHVPYR AECNECQGHF TINQFKRSTW TCPHCGAERK YRIVSGLEFM VNRIEIVRGT QFADPNATRG AA
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