| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17070 |
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| Symbol | |
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| ID | 8395597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1925888 |
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| End bp | 1927852 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986461 |
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| Product | alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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| Protein accession | YP_003144075 |
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| Protein GI | 257064403 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGC CGAGCCGTAC CAATCTGAAT CTGCCGGATG CCGACTTATA TTTGTTCGGC
CATGGGGATG CGCGTCGGGC ATACCTGCTG TTCGGTTGCC ACGAGCTGCC TCGCGAAAGC
GAATCCGACG TCCGCACGTT CCGGTTCGTG CTTTGGGCCC CTCATGCCCG GTCGGTAAGC
CTTGTGGGCT CCTTCAACCA ATGGGACCAG GCGGCAACGC CCATGGAGCA GGTGAGCGAA
GGCATCTGGT GCTGCGTGGT GGAAGGCCTT GAGAACGGCG ACCCTTACAA ATACGCCATC
GAAGGTGCCG ACGGCACCGT GCAGCTGAAA GCCGACCCCT TCGCGTTTCA TGCGGAAAAC
GGCCTGTCCA CCGCTTCCAA GGTGTGGACG CTGGACGGCT ACGACTGGCA TGATGCCGAC
TGGATGGATG CCCGAGCCGC ATCCGACCCG CTGCACGGAC CCATGTCCAT CTACGAGCTG
CACCTGGGTT CGTGGCGCGT GGGCGAGCAG GAAACCTTCC CCAACTACCG TATTGTGGCT
GACCAACTGG TGGAATACTG CCAGCAGATG GGCTATACCC ATGTGGAGCT CATGCCGCTG
ACGGAATTCC CGCTGCCGGC ATCTTGGGGC TACCAGGCCA CCGGCTACTA TGCGGTGTCG
TCGCGATACG GCACGCCCCA GGATTTCATG TACATGGTGG ACACGCTGCA CGCCGCAGGC
ATCGGCGTCA TCCTGGACTG GGTACCGGCG CACTTCCCGA AGGACGCCTT CGCCTTGGCT
CGCTTCGACG GCACGCCGCT TTTCGAATAC GCCGACCCGC GCAAGGGCGA GCATGCCGAA
TGGGGCACGC TCGTGTTTGA TTACGGAAAG CCCCAGGTGG TAAGCTTTCT GGTGTCGTCG
GCCATGTTCT TTTTGGACGT CTACCACATA GACGGTATCC GTGTGGACGC CGTCACGTCC
ATGCTGTACC TGGATTACGC CCGCACCGAA TGGGTGCCCA ACATCCACGG CGGCAACATC
AACCTGGAGG CCGTCGATTT CATTCGCAAG CTCAACACGG CCGTTCGGGA AACCTATCCC
GGCGCGGTGA CCATCGCCGA GGAATCCACA TCGTATCCCA AGGTCACAGC CCCGGTGGAA
TACGACGGCC TGGGATTCAC CTTCAAATGG GACATGGGTT TCATGCACGA CATGCTGGAG
TACTGCTCCA TGGACCCGCT GTTCCGCCGC GACCACCACG ACAAGCTCAC CTTCGGCATG
GTGTACGCCT TCTCCGAGCA TTTCGTGCTG GCCTTCAGCC ATGACGAGGT GGTGCACGGC
AAGAAATCCA TGGTGGACAA GATGTTCGGC GACTACCTGC AGAAATTCGC GAACCTGAGG
GTGCTCATGG GTTGGCAGTT CGCCCGCCCC GGCAAGAAGC TCACCTTCAT GGGTTCGGAG
TTCGGCCAGT TCATCGAGTG GGATTTCGCC AAGCAGCTGG ACTGGTTCAT GCTGAAGTAC
CCCATACACA ACGGGCTTCA CCTGTACAGC GCAGCCCTGA ACAAGATGTA CGCGGCCCAT
CCCGCCCTGT GGCAGATCGA CGACTGCTGG GACGGGTTCC AATGGGCCAA CGTGGACGAC
CGGGACGAAA GCGCGGTGGC ATGCCTGCGC CAGGCTCGTG ACGGATCGCC CGACGTCCTG
TGCTGCTGCA ACTTCACGCC CAACGCGGTC GAAGGATTCA CGGTCGGGCT TCCGACCTGC
GGCGAGCTGC ATCTGCTGCT GGACAGCGAC ATCGAGCTGT ACGGCGGCAC CGATTGCGGC
GCGGCCGTGA TCGAGGCGCC TGCCGAGGAG CCTTTCGAAG GGCACCCCTG CAGCGCCAAA
CTGAAACTGC CGCCCATGTC GGCCGTGTTC TTCGAGTTCG TGCGGAGTAA TCCTCCCAAG
GAGACCGAGG ACGCGTTGCC AGGCGGCCCC GAAACGAAAG AATAG
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| Protein sequence | MDQPSRTNLN LPDADLYLFG HGDARRAYLL FGCHELPRES ESDVRTFRFV LWAPHARSVS
LVGSFNQWDQ AATPMEQVSE GIWCCVVEGL ENGDPYKYAI EGADGTVQLK ADPFAFHAEN
GLSTASKVWT LDGYDWHDAD WMDARAASDP LHGPMSIYEL HLGSWRVGEQ ETFPNYRIVA
DQLVEYCQQM GYTHVELMPL TEFPLPASWG YQATGYYAVS SRYGTPQDFM YMVDTLHAAG
IGVILDWVPA HFPKDAFALA RFDGTPLFEY ADPRKGEHAE WGTLVFDYGK PQVVSFLVSS
AMFFLDVYHI DGIRVDAVTS MLYLDYARTE WVPNIHGGNI NLEAVDFIRK LNTAVRETYP
GAVTIAEEST SYPKVTAPVE YDGLGFTFKW DMGFMHDMLE YCSMDPLFRR DHHDKLTFGM
VYAFSEHFVL AFSHDEVVHG KKSMVDKMFG DYLQKFANLR VLMGWQFARP GKKLTFMGSE
FGQFIEWDFA KQLDWFMLKY PIHNGLHLYS AALNKMYAAH PALWQIDDCW DGFQWANVDD
RDESAVACLR QARDGSPDVL CCCNFTPNAV EGFTVGLPTC GELHLLLDSD IELYGGTDCG
AAVIEAPAEE PFEGHPCSAK LKLPPMSAVF FEFVRSNPPK ETEDALPGGP ETKE
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