| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_17010 |
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| Symbol | |
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| ID | 8395591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1914454 |
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| End bp | 1917024 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644986455 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_003144069 |
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| Protein GI | 257064397 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCCT GCCATAATTC GCGAGACGTC GCGTACCGAC TGCCTTACGG CGCCGTTCAA
CAGGGCGAAT CGGTTGCGCT TTCGATAGAC CTTTGGGACG CACAAGGCGC CATCGTTCGG
CTGCGCACCT GGACCGCCGA ATCGGGCGAA CGCATATACC CCATGGATGC CGTTGTAGAG
CTGCACGGGG CCGTGCGGCA CAAGGTTGAG CTCGCATTCG ACGGCGCGGG CATCGTGTGG
TACCACTTCA TCATCCAGAT GGCAGACGGC CGCGTCCTGC GCTACGGAGC CTGCGACGGC
AAGACCGGAG GCGAAGGCCG CCTGTACGAC TGGGAGCCGC CCAGCTTCCA GCTGACCGTG
TGCGACCCGA ACGGCATCGC CCCGTCGCGG GACGAAGACG ATCTGCGCCG GAGCCAATCG
ATGTTGGGTC CCGTCGCCGA TTTTCTGCTA GGGCGAATTT CGGCACCTGA GCTGGCCGAA
ATGATCGAGG CGCTACGTGA GAACTACCCC GATGAAACCT TCCGCCATGC GCTGGCGTTT
CTGGAAGGAA TGGACGATGA CCGACTGCTT GGATTGTTCA GCGGCCTTCC CGAAAGCGAA
CTGACATTAA ATGACGGTGG ACCCCTGGTT CTGGATGACC ACCATGCGGG CATCGCGAAA
GGACGCTTGT GGTGCGCAAG CCTGCTGCAG ATGCTTTCGC CGGCTGGCAC GCGACAGACG
GAATCGTGCC CGGTCGTGCA CACGGACCGC GACTGCCAGG CCATTTTCGA CAACGCACGG
GACCTGCGCG AAACGCTTCC CCTATTTATG GACGGAACGT TCTCCTGCTT TGCGGCGAAC
GAAGACGTGC TGGGCTTTTG GCGGCGCGGG GCCGACGGGA CATCGGCATG CGTCCTGGTC
AACGGCTCGC TTCAAAACGC GCACGACGTG TTCGTCCCTA TGACGGGCGA AGCGGTATCC
GAGGTGATAG GCGGCTACGA TGTGCCGGTG TGCGACGCCT CCGAGCTGGA CGGGCGCGTC
GACGCTCCGC CAAAAGCGCA GCGGTACGCG CGGGTGCGCC TGTCCCAAAT CGGCTCGGCC
GTGGTGTATT TCCATCCCAC ACAACGGCTG CAGCTGCCCA TGGATGCAGG GCTGGGCGTG
CTGGCGCATA TAACGAGCCT TCCCGTATCG AAAAACCCGA ATGCTCCGGA GGCGTCCGAT
AAAGCCGACG CCGGACGCAC CGCTCCAGCC GCATCCGAGA AGGCCGAAGC CGAACGCGAC
CCCTCGGGCG TACCCGACAA AAACCCAGGC ACATTGGGCG CGCCGGCGCG GGAGTTCGTG
GATTGGCTGG CCCAGGCGGG CGCGCGGTAC TGGCAGGTGC TGCCGGTTAA CCCCACCGAC
GAGTACGGCA GCCCTTACGC CGGCATAAGC GCCTTCGCCG GCAACACACG TCTGTTGGAG
AGACCGTCGG CGCCCGATAC AGGCGATGCC GCCGACCGCG ACCCTGATGC GTACCGCAGG
TTCTGCACAC GCGAAGCCGA CTGGCTGGAA CCCTATGCGG CATTTATGGC CATCCGACAG
AAGCTGGCCG CGACGTCGGA CGTCGAACCC CTCCCCTGGC AGGACTGGCC CAATGCGTAC
CGCAGCTTCG ACCCTTCCGT CATTCAGGCC GATCCTGAAC TGCGAGAACA TGCCGAACGG
TGCCGCCGCG CCCAATTCGA GTTCGAGCAG CAGTGGGACG ACCTGCGCCG ATACGCCAAC
GCACGAGGCG TGCTCATAGT AGGCGACATG CCTATATATG TAAGCGCGGA CAGCGCCGAC
GTGTGGGCCA ACCCCGAGCT GTTCCAGCTG GAACCCGACG GGAGGCCCGC CGCCGTGGCA
GGCTGCCCTC CGGATGCCTT CGCCGAAGAG GGCCAGCTGT GGGGAAACCC CGTCTACAAC
TGGGACGCTT TGCGGGAAAG CGGCTACGAC TGGTGGCTGC GCCGTCTGCA GCGGGCCTTC
AGGCTCTACG ATTTCGTGCG CCTGGACCAC TTCATCGGGT TTTCGCGCTA CTACCGCATC
CCCAAAGGCA AGCCGGCCAC GGAGGGAAAC TACTGCCCGG GCCCGGGCGC GGACCTGTTC
CGCACCGCCT ACGAACAGTT CGGGCCACTG CCCGTGATCG CTGAGGATCT TGGCTCCATC
ACGCCTGCCG TGCGCGCGCT GGCCGCCGCG TGCGGGTTCC CGGGCATGGA CGTCGTGCAG
TTCGCCGACG GCAACGACCC GCTTTCGGGC TGGCGCCCGC GCCCCGCCAA GGTTGCCTAC
ACGGGCACCC ACGACAACCA GACGCTGGTG GGCTACGTGC GGAAGCGCTA CCCTGACCTG
GACTGCCAGG CTGCGGTGGA CAGGCTGATG CGGGATGTGG TCACCTGCGA AGCGCCCGTG
GCGGTGCTGC CCCTGCAGGA CCTGATGGGA CTCGACGACG ACGCGCGCAT GAACACCCCG
GGCACGTCGC AGGGCAACTG GACGTGGCAG GCCGACAGGC AGGCCCTGCG CCAGACAGGT
GCTACCCTGC ATGCGCTGGT CGACATGAGA AACGCTTCGC TTGAAGCGTA G
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| Protein sequence | MQACHNSRDV AYRLPYGAVQ QGESVALSID LWDAQGAIVR LRTWTAESGE RIYPMDAVVE
LHGAVRHKVE LAFDGAGIVW YHFIIQMADG RVLRYGACDG KTGGEGRLYD WEPPSFQLTV
CDPNGIAPSR DEDDLRRSQS MLGPVADFLL GRISAPELAE MIEALRENYP DETFRHALAF
LEGMDDDRLL GLFSGLPESE LTLNDGGPLV LDDHHAGIAK GRLWCASLLQ MLSPAGTRQT
ESCPVVHTDR DCQAIFDNAR DLRETLPLFM DGTFSCFAAN EDVLGFWRRG ADGTSACVLV
NGSLQNAHDV FVPMTGEAVS EVIGGYDVPV CDASELDGRV DAPPKAQRYA RVRLSQIGSA
VVYFHPTQRL QLPMDAGLGV LAHITSLPVS KNPNAPEASD KADAGRTAPA ASEKAEAERD
PSGVPDKNPG TLGAPAREFV DWLAQAGARY WQVLPVNPTD EYGSPYAGIS AFAGNTRLLE
RPSAPDTGDA ADRDPDAYRR FCTREADWLE PYAAFMAIRQ KLAATSDVEP LPWQDWPNAY
RSFDPSVIQA DPELREHAER CRRAQFEFEQ QWDDLRRYAN ARGVLIVGDM PIYVSADSAD
VWANPELFQL EPDGRPAAVA GCPPDAFAEE GQLWGNPVYN WDALRESGYD WWLRRLQRAF
RLYDFVRLDH FIGFSRYYRI PKGKPATEGN YCPGPGADLF RTAYEQFGPL PVIAEDLGSI
TPAVRALAAA CGFPGMDVVQ FADGNDPLSG WRPRPAKVAY TGTHDNQTLV GYVRKRYPDL
DCQAAVDRLM RDVVTCEAPV AVLPLQDLMG LDDDARMNTP GTSQGNWTWQ ADRQALRQTG
ATLHALVDMR NASLEA
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