| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_16690 |
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| Symbol | |
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| ID | 8395559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1877709 |
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| End bp | 1879094 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644986423 |
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| Product | Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II |
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| Protein accession | YP_003144037 |
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| Protein GI | 257064365 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4188] Predicted dienelactone hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.400714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTTGG CGGTGTTCGT TGTATTGGCG GCTTTGGAAA TCGCGCTCGC GGTGCGGACA
TACACGAAGA GGCACGAAAA CTCGAAGCAG CGAGAGGCCC GCATCTTCGT CCGCGTAGTC
CAGCTGGCTG TGGTATCGGT TGCGCTGATT GTGCCCACCG GGCAGAAATG GCGGTTCGTT
CCTGTGCTCT GCTTCCTGAC ATTGCTGCTG GTCATCGCAG TCATAGTTGC GCTGGCCAAA
CGGAACATTG CAGGCAAGCC CCGCAAGCAA GCCGGCGTTA TTGCCTCCTG CGTGGCGTGC
GTGTCAGCGC TGAGCGTTCT GCTGGTTCCC GCATTCGTGT TCACGGGATA TTCCGGTCTG
CCGACCACAG GCGAATACCA GGTCGCGGAA ACCTCCGCCA TTCTGGTCGA CGGCTCGCGC
ATCGACCCGT TCGAGCAAGA CGGAAGCGCC CGCGAAGTGC CGGTCCACTT CTATTACCCC
GCTGCCACGA ACGGCCACGC AAGCGAGTTT CCGCTGGTCG TGTTCTCGCA CGGCGCATTC
GGCTACTATC AGAACAACAC CTCCACATAC ATGGAGCTCG CAAGCAACGG TTACGTTGTC
GTGGCGCTGG ACCATCCGCA CCATGCCTTC TTCACCACCG ACACCACCGG GCAGACGGTC
ATCGTCAACC GGGATTTCCT GAACACCGCG CTCGACATCT CGTCGCAGGA CGCCACCAAG
CTGGACCCGC AGGAGCAGCT CGCCATCTAT CAGGATTGGA TGGCACTGCG CACGGCGGAC
ATGGGATTCG TGCTTGATGA GCTGGAGCAG GCCGGCGAAA GCGCCGTGCT GGACGGCAGC
TGGTTTACAG CGGACAACAA CGACGATGAA ATCCTGGGCA TCCTGGGCAC CATCGACTAC
TCGAAAATCG GCCTGATGGG ACACTCCATG GGCGGCGCGA CCAGCGTTCA GCTGGGGCGC
GAGCGCGACG ACGTAACGGC CGTCATCGAT CTGGACGGCA CGATGCTCGG AGAGTACACG
GGCGTATCCG ACGGCAAACT CACCGTAAAC GAAGAGCCCT ACACGGTTCC CGTGCTTGAA
TTCGTGAACT GGGAGACCTA TAACGAATTG GCCAAAGGTA TGGAGGAGTT CCGCGCAGAA
GGCGGCGCGT ACGCCAACGA CGAGCTGATG CGCAACGCTG CGGACGGCTA CACCGTCACA
ATTCGCGACA CGGAGCACAT GGACTTCACC GACCTGCCGC TGCTGTCCCC CACCCTGGGC
AACATGCTGG GCAGTGGCGA GCGCGACTCA GCGGAGACGA TGACCATCGT CAACTCGGTT
GTGCTGGACT TTTTCGACTG CTATCTGAAA GGACAGGGCG CTTTCTCGGT GCAAGACGTG
TACTGA
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| Protein sequence | MGLAVFVVLA ALEIALAVRT YTKRHENSKQ REARIFVRVV QLAVVSVALI VPTGQKWRFV
PVLCFLTLLL VIAVIVALAK RNIAGKPRKQ AGVIASCVAC VSALSVLLVP AFVFTGYSGL
PTTGEYQVAE TSAILVDGSR IDPFEQDGSA REVPVHFYYP AATNGHASEF PLVVFSHGAF
GYYQNNTSTY MELASNGYVV VALDHPHHAF FTTDTTGQTV IVNRDFLNTA LDISSQDATK
LDPQEQLAIY QDWMALRTAD MGFVLDELEQ AGESAVLDGS WFTADNNDDE ILGILGTIDY
SKIGLMGHSM GGATSVQLGR ERDDVTAVID LDGTMLGEYT GVSDGKLTVN EEPYTVPVLE
FVNWETYNEL AKGMEEFRAE GGAYANDELM RNAADGYTVT IRDTEHMDFT DLPLLSPTLG
NMLGSGERDS AETMTIVNSV VLDFFDCYLK GQGAFSVQDV Y
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