Gene Shel_16250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16250 
Symbol 
ID8395515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1825964 
End bp1826287 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content56% 
IMG OID644986379 
ProductSSU ribosomal protein S10P 
Protein accessionYP_003143993 
Protein GI257064321 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00216069 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000702102 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGGAAA TTAAAGTGGC TAATCAAAAG ATCCGCATCC GCCTGAAGGG CTACGATCAT 
GAAATCGTGG ATCAGTCCAC GAAGCTGATT GTGGACACCG CCCAGAAGAC CGGTGCAAAG
GTCTCCGGAC CTATTCCCCT GCCCACCGAG CGCAACCTGT ACTGCGTCGT TCGCGGTCCC
CATGTCGACA AGGACTCCCG TGAACAGTTC GAGATGCGTA CGCACAAGCG CCTGATCGAC
ATCCTGGAGC CGACCCAGAG CACCGTTGAC TCGCTCATGC GTCTCGATCT CCCGGCTGGT
GTCGACATCG AGATCAAGCT GTAA
 
Protein sequence
MEEIKVANQK IRIRLKGYDH EIVDQSTKLI VDTAQKTGAK VSGPIPLPTE RNLYCVVRGP 
HVDKDSREQF EMRTHKRLID ILEPTQSTVD SLMRLDLPAG VDIEIKL