| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_15860 |
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| Symbol | |
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| ID | 8395476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1788306 |
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| End bp | 1789502 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644986340 |
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| Product | site-specific recombinase XerD |
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| Protein accession | YP_003143954 |
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| Protein GI | 257064282 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0008266 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000733221 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGGCC TGAGGGTCTG GTACGAGGGC GGCATGTGGA GGGCGAGGGC GTACCTCGCC
AAGGCCGACG TGGTCGAGGG CGGGAACCGC CGCCCCTACC GCAGCCTGCC CGGCGCCGGA
TGCGAGGACG AGGCGAGGCA GCAGGCCCGG GAGTGGCTCT CGGGTCTGCT GCGCGTCCGC
GGCGCGAGCG CGTCGGGGCT GGTCCGGGAC CTCGTGCGCG CCTACGTCGC GAGCCGCGAG
GGCGCCGGCG ACATAGCCGT TAGCACCGCG AAGACGTACA GGACGATCTG CCGCAGGTAC
GTGGAGCCCT ACATCGGGCA CATGGACGCA TCGGAGGTGC GGCCGCACCA CCTGGAGGAG
CTGTACGGGA CGCTGCTGGA CGACGGCGCC ATACGGGGCG GCGGGATCGC GCCCGCGAAG
GTGCTCGGCG TCCACTGGTT CCTGTCGGCG GCCTTCGACT GGATGGTCGC CCAGGGCTTC
TGCGCGTCGA ACCCGGCGGC CAGCGCGTCG AAGCCGAGGC CCGCCAGGGC CGAGGCGAGG
GCGCTCACGG AGGGCGAGAT ATCCATCCTG GCCGCCGAGC TGGAGGCCAG GATGGCCGAC
GGCTCGCGCG ACGCCGACGG GATCCGGCGC AGGACGGTCG CGTTCGCGGC CTGGCTGGCG
CTCAACACGG GCGTCCGCTG CGGCGAGGCC TGCGCGCTGT CCCGATCCGA CGTGAGCCTG
CCCCTGGGCG ACCTGTACGT GCACTGCACG ATGACCGAGC CCGCGGGAGG GCCGCCCGCG
AGGTCGCGCG CCAAGACCGC GAGCTCCGTG CGGCACGTGC TGATGGGCCC GTCGGCCGCG
CAGGCGGCCG CGGAGCATAT CGCCTGGCAG GACTCGTGGC TGCCGGCGGC GCGCCGCGAC
GCGCCGCTGC TGTGCGCCCC CGACGGGTCG TGGATGCGCC CGTCCGCCGT CTCGCGCGGG
TTCTCCGCCC TGCGCGACGA GGTCGGGCTG CCGCGGGACA CGCACTTCCA CACACTCAGG
CACACCCACG CGACGCACCT CCTGCGCGAG GGCGTCCCGA TGAACGAGGT GAGCCGGCGC
CTGGGGCACT CCAAGGTGGC CCTGACGCTG GAGTGGTACG GGCACGTGCT GCCCGGGGAG
GACAGGGCCG CGGCGGAGGC GTTCGAGAGG GTTTCGAGAA GGGTTCGAGG GAAGTGA
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| Protein sequence | MTGLRVWYEG GMWRARAYLA KADVVEGGNR RPYRSLPGAG CEDEARQQAR EWLSGLLRVR
GASASGLVRD LVRAYVASRE GAGDIAVSTA KTYRTICRRY VEPYIGHMDA SEVRPHHLEE
LYGTLLDDGA IRGGGIAPAK VLGVHWFLSA AFDWMVAQGF CASNPAASAS KPRPARAEAR
ALTEGEISIL AAELEARMAD GSRDADGIRR RTVAFAAWLA LNTGVRCGEA CALSRSDVSL
PLGDLYVHCT MTEPAGGPPA RSRAKTASSV RHVLMGPSAA QAAAEHIAWQ DSWLPAARRD
APLLCAPDGS WMRPSAVSRG FSALRDEVGL PRDTHFHTLR HTHATHLLRE GVPMNEVSRR
LGHSKVALTL EWYGHVLPGE DRAAAEAFER VSRRVRGK
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