Gene Shel_14920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14920 
Symbol 
ID8395382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1714530 
End bp1715165 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content61% 
IMG OID644986246 
Producthypothetical protein 
Protein accessionYP_003143861 
Protein GI257064189 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0239804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCCT ACGCAACCAT ACGCGGCACG GCAACGGCCG AAATCGAGAT CAAAAAGAGC 
AGGTTCATCG CGAGCCTGGC CCATGTCGAG ACCGAAGACG AGGCGCTTGC GTTCCTCGCC
AGCATACAGG CAGCCAACCG GCTTGCCCGC CATAACGTCT ACGCCTACAT ACTTAGAGAA
GGCGGAGCAG GAGGCACGCA GCGCATACGT TACTCCGACG ACGGCGAACC CCAGAAAACC
GCCGGCATGC CGACGCTGGA AGTCATCCAA CATGCGGGGC TTTCCGACGT CATCTGCGTG
ACCACCAGGT ATTTCGGCGG GACGTTGCTC GGAACCGGAG GCCTGGTGCG CGCGTACACG
CAGGCCGCGC AGGAAGCCGT CGCCGCAGCC GATACGGTGG TCATGTCGCG ATGCGTGGAC
GTAGTCATCG CCATAGGCTA CCCTCTTTAC GACCAGCTCA TGCACCTGGC CGAACGTTGC
GGTGCCAAAA CGGTGGATAC AAGTTACGCC GACTCTGTTA CTGTCACGCT GCGCATGCTC
GACGGCACCC AGCAAGCGCT TTTAGACGAG CTGACCGCTC TGTGCCGCGG CAACGAAGAC
GTGCTCGTGG ACGGACCGTT CGACGCCGCG TTTTAA
 
Protein sequence
MDSYATIRGT ATAEIEIKKS RFIASLAHVE TEDEALAFLA SIQAANRLAR HNVYAYILRE 
GGAGGTQRIR YSDDGEPQKT AGMPTLEVIQ HAGLSDVICV TTRYFGGTLL GTGGLVRAYT
QAAQEAVAAA DTVVMSRCVD VVIAIGYPLY DQLMHLAERC GAKTVDTSYA DSVTVTLRML
DGTQQALLDE LTALCRGNED VLVDGPFDAA F