Gene Shel_14770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14770 
Symbol 
ID8395367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1696227 
End bp1697339 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content58% 
IMG OID644986231 
ProductUDP-galactopyranose mutase 
Protein accessionYP_003143846 
Protein GI257064174 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0562] UDP-galactopyranose mutase 
TIGRFAM ID[TIGR00031] UDP-galactopyranose mutase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0269497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAT ACGATTACCT TGTCGTCGGT GCAGGCCTGA CGGGTGCCGT ATTCGCCAAT 
GCTGCGCGTC GGGCTGGCAA AACCTGCCTG GTCATCGATC GTCGCAACCA TATTGCCGGC
AATGTGTACA CGAAAGAGAC CGAAGGCATC AACGTCCACG TCTACGGAGC CCATATCTTC
CATACGTCTC TCAAGGACGT GTGGGAATAC GTCAACCGGT TCGCGGAGTT CAACAACTAC
GTGAACAGCC CCGTTGCCCT GTACAAGGGG CAGACGTACA ACATGCCTTT CAACATGAAC
ACGTTCTCGA AGATGTGGGG CGTGGTCACG CCGGCCGAAG CGCGCGCCAA GATAGACGAG
CAGATTGCTG CCGAAGGCAT CGGCGAGCCC GAGAACCTTG AGGAGCAGGC GCTTTCCCTC
GTGGGACGCG ACATCTTCGA GCGCCTGGTC AAGGGCTACA CCGAGAAGCA GTGGGGTCGC
GACTGCAAAG ACCTCCCGGC TTCCATCATC AAGCGTCTCC CGTGCCGTTT CACCTACGAC
AACAACTACT TCAACGACCG GTTCCAGGGC ATCCCTATGG GCGGCTACAC GGCCATGGTC
GAGCGCATGC TGGAAGGAGT GGACATCCGG CTGAACACCG AGTACCGCGA CCTGATCGCT
GCGGAACCGG ACATCGCCGA CCGTATCATC TATTGTGGTC CCATCGACGA TTTTTACGAC
TTTAAACTGG GCAAACTGGA GTACCGGTCA CTTCGCTTCG AAAGCGAGGT GCTCGACGAG
GAAAACCACC AGGGTGTGGC CGTGGTGAAC TACACAGAGC GCGAGGTGCC TTGGACCCGC
ATTATCGAAC ATAAGCATTT CGAGTTCGGC ACCCAGCCCA AGACCGTCAT CACCCGCGAG
TATCCGTCGG ATTGGAAGCC TGGCGACGAG CCTTACTATC CCGTGAACGA CGCACGCAAC
GAAGCGCTGT ACAAGCAGTA TGCGGAGCTT GCGGAAGGCG AGGGTCGCGT GGTGTTTGCG
GGCCGTCTGG GCGGATACAA GTACTACGAC ATGGACAAGG CTATCGCCGC TGCCTTCGAA
CTGGTGCGGG CGGAGCTGAA AATCGAGCCG TAA
 
Protein sequence
MSQYDYLVVG AGLTGAVFAN AARRAGKTCL VIDRRNHIAG NVYTKETEGI NVHVYGAHIF 
HTSLKDVWEY VNRFAEFNNY VNSPVALYKG QTYNMPFNMN TFSKMWGVVT PAEARAKIDE
QIAAEGIGEP ENLEEQALSL VGRDIFERLV KGYTEKQWGR DCKDLPASII KRLPCRFTYD
NNYFNDRFQG IPMGGYTAMV ERMLEGVDIR LNTEYRDLIA AEPDIADRII YCGPIDDFYD
FKLGKLEYRS LRFESEVLDE ENHQGVAVVN YTEREVPWTR IIEHKHFEFG TQPKTVITRE
YPSDWKPGDE PYYPVNDARN EALYKQYAEL AEGEGRVVFA GRLGGYKYYD MDKAIAAAFE
LVRAELKIEP