| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14490 |
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| Symbol | |
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| ID | 8395339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1660679 |
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| End bp | 1662301 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644986203 |
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| Product | LPS biosynthesis protein |
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| Protein accession | YP_003143818 |
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| Protein GI | 257064146 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3475] LPS biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.71965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.345378 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCA CTCAAGAACA TCTGCTCAAG CTCCTGCTCG AAATCGACGA GATTTGCAGA
AGGCATGACA TCACATATTT CCTAGAAGCC GGCACGCTGC TCGGCGCCGT GCGTCACAAC
GGATTCATCC CCTGGGACAA TGACCTCGAC ATCACCATGA AAGAGGCCGA TTACAACCGG
TTTGTGGAAG TGTGCCAGCA AGAGCTCGAC CCGACGAAAC GCGTCATGGC CGACAATCGC
CGCAACCGCG AATATCCCAG CGTATTCGGT CGTTACATCG ACCGTGAAAC CTGCCGCATC
AACAACACCA CGTTGTTCTG GGACGACTAC ATCGGACAGA GCATCGATGT GTTCTGCATG
GTCGAACTGC CCGCCGATCC GGAAGACATC TACGAGGCAG AGGTCCGCTA CAACGCTTAC
GACGAGGTGG TCAACCGGAG CTTCCGCCAT TTGCGCCGTA AGCGCAGCTA CACCATGGAT
CGGTACAACG AATACCTCAA AGCGTACGAG ACCGACCGCG ACGCTTTCTT GGCGGAGGTT
GAGCCTAAAA TCTTCGGCCA CACCTATGAA GGCTCCCAAT GGTACATGGT GACCAGCGCC
AACGGATACA ACATCCTGCC TCGCGCACCT TTCGAAAAGG TCGCATACGT GTCCTTCGAG
GGACACATGG TTCCGATTCC GGAAGACTAC TTCGACTTGA TGGTGTATTA CTACGGCGAT
ACGTTTGGGC TCATTCCCGA CAAAAAGCAG ATCCATACGG AGATGTCCCA CAACCACATC
CCCTGCAAAT ACTATTCAGA TGAGTTCCGC GCGTGCATCG ACATGCCGGA GTTTTTGGGC
AAGCGCGCCA CCTGGAAAAA CAACATGATG CAGGAAGGCG CCATGTGGAC CGATGCCTAT
CTCGACTACA CGTCCTGCCT CGGCCTCATG TTGAAGATGG ACATCGAAGA CGAGATCGCC
GAAAAGAACA TCGACGTCAT GGACCTTGTG AACAACCCCA CTCCAGAGGG TGACGAAGTA
CTCCGCAATT TGTTCAATCT GTATATCGAG CGGCAGACCT CCTCGACGGT GGTCTATGCC
AAATGCCATC TTGCCCTCGG CGAGGATCTT GAGTACGCAG CGCTATACAC AGCCTTGTTG
CTAAAAGGAG ACAGAGCCGC CTTCGACGAT ATGATCTCAG TAAGGACCGT CAACCGCGTT
CCCATGACGG ACCGTATTCA GAACCTGGTT GATTACGCCC GTCATTACCG CGCCGCAAAG
AAGTTCATCC TGTATCGCGA ATTCGCTAAA TCCCAGGAGC ACATCGACTG GTGTGTCGAG
CGCCACGGTA CGAACAGCAA CTTCAAAACA ATGCAACTTA TGGTTGACAG CGGACTGGCG
GAAACAGCCG ATGATTGGCA ATCCGTTCTG AACTCTGCAG AAGAGATACT GGTCGAAAGC
CCCGACAACG AATACGCATG GGAAGCCAAG GCCGATGCGC TTCGGTTCAT GGGCGAAAGA
GAACAGGCGA ACGAGATCTA TGTCAGGCTT CGAGATACGG CCGTTGACGG TTTCGTCATG
AACCGTGCCA TCCAACAGGT CGGACCGTCC GAAACGCCGC GTTTCTCAAC CACCAAGGAG
TAG
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| Protein sequence | MTPTQEHLLK LLLEIDEICR RHDITYFLEA GTLLGAVRHN GFIPWDNDLD ITMKEADYNR
FVEVCQQELD PTKRVMADNR RNREYPSVFG RYIDRETCRI NNTTLFWDDY IGQSIDVFCM
VELPADPEDI YEAEVRYNAY DEVVNRSFRH LRRKRSYTMD RYNEYLKAYE TDRDAFLAEV
EPKIFGHTYE GSQWYMVTSA NGYNILPRAP FEKVAYVSFE GHMVPIPEDY FDLMVYYYGD
TFGLIPDKKQ IHTEMSHNHI PCKYYSDEFR ACIDMPEFLG KRATWKNNMM QEGAMWTDAY
LDYTSCLGLM LKMDIEDEIA EKNIDVMDLV NNPTPEGDEV LRNLFNLYIE RQTSSTVVYA
KCHLALGEDL EYAALYTALL LKGDRAAFDD MISVRTVNRV PMTDRIQNLV DYARHYRAAK
KFILYREFAK SQEHIDWCVE RHGTNSNFKT MQLMVDSGLA ETADDWQSVL NSAEEILVES
PDNEYAWEAK ADALRFMGER EQANEIYVRL RDTAVDGFVM NRAIQQVGPS ETPRFSTTKE
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