Gene Shel_14210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14210 
Symbol 
ID8395311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1622603 
End bp1624732 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content61% 
IMG OID644986175 
Productpenicillin-binding protein 2 
Protein accessionYP_003143790 
Protein GI257064118 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTG CTGCGCTTAT AGCCCTTGCC ATTGCCATAG TCATTGTCGT GACGGTGCTC 
GTCGTGCGCA GCATGCGCGG GCGCGGTTCC GTTTCCGTAC GCGACGACGT GTCTTCCATC
GGGTCGGCGA CCCCCTTGGA CATGGGCGGC GGCTCGAGCA CCAAGACCAA CAACGCCTCG
GGCACGAGCA CGGGGCATTC GCCGTATGAC CGCATCAGGC CGCGGTTCAT GGCCATGTAC
GTGCTTATCG CAGCCATTTT CGGGTCGTTG GGCACCAAGC TGTGGAGCAT GCAGGTCTTG
AACTCGGAGA AGTATCTTTC CGACTCCCAG GACAACCTGC TCACCACCAT CAAGACCCCT
GCATCACGCG GGCGAATCTT CGATACTGAA GGGATCGAAC TGGTCAGAAA CCAGATCAAC
GCGACCATCC TCGCCGATGC CGACGTGGCG TCCCAACACG ACGTCATCGT CCGCTTGTCG
GCGCTGCTCG GCCTTCCGTA CAACGTGATT CGCCAGCGCA TCCAGGACTC CACAAACGGA
GCCCAGGCCC AGCGCGTGGT CACGTCGTCT CCGCGCGAAC GCGACGTTGC CTACATCGCC
GAACACCCCG ACGCCTTCAA CGGCATCTCC ATCGAGGACC GTCCGCACCG TGTGTATCCG
TACGAGGCGC TGGCCTGCCA GCTGCTGGGA TACGCGGGCA CCGTGTCGCA GGAAGAGCTG
GACAACGCCC CGGAAGGCTC CGACTACCAG AGCGGTGACG AGGTGGGCAA GTCCGGCATA
GAGGCCACAT ATGAAAGCCT GCTTTCGGGA ACACATGGCG AAAGGGTCGT GGTGGCCGAC
GTGGACGGCA CGGTCCATGA GGTGAAAAGC GAGACCAGGC CCACCCAGGG CAACGACGTG
TACCTCACCA TCTCTGCGCG GGTTCAGGCT GTGGCCGAGC AGGCCATGGC GAAGCTGATC
GCACCCTACG GCACCATCGG TGACGGCATC GGCACGGCCG GTGCGGTCGT GGGCATGGAC
CTGAGCAACG GCGATGTGGT GTGCCTTGCC AACTTCCCCA ACTTCAATCC TGCCAACTTC
ATCGGCGGCA TCTCGCAGGA TGACTGGGAC CGCTACAACG ACGACGACGG TTATCGCCCG
CTCATGAACC GCGCCATAGC TGGCACCTAC CCCGCTGCTT CCACATTCAA GTCGTTTACG
GGTGCTGCCG CCATCCACTA CGGCTTCGTG ACCGAAGGGT CCGGATGGAA CTGCACGGGC
GAGTGGACGG GCTTCGGCGA CGACTACGCC CAGAAGTGCT GGGACACCGA CGGCCACGGA
TACCTGAATT TCCGCGAAGG CATCGTGTAT TCCTGCGACG TGGTGTTCTA CGACATTGCG
GCCCAGTTCT ACTACGCTCG GAACGAAATC GGCGACGCAG CCATGCAGGA ATATGTGAAA
CTGTTCGGAT TCAGCCAGGC CACCGGCATT CCGCTGTCGG GCGAAGCCAC CGGTGTCGTT
CCTACTCCGG AATGGAAGAA GGAGTACTAC TCCAACCAGC CCGAAGAGGC CCAGTGGGTT
CCTGGCGATA TGACCAACAC GGCCATTGGA CAGGGCAACG TGCTCATCAC GCCCATCCAG
CTTGCCGTCG CTTACGGCGG CATTGCCACA GGCAAACTTT TCACGCCGAA CCTGCTCAAA
GAGGTCCGCA ACTCTGAAGG CGAAATCGTC CTTGAAGGCG AACGCTCTTC CCGTGACCTG
GATACGAGCC TCATCGACGA CAAAGTCATG GACACCATCC GCGACGCGCT TCGGGGCGTG
GCGTTGGAGG ACGGCGACAT ACCCAAGATG ATTGAGGAAT ACGGCTATCA GGCTGCGTGC
AAGACCGGCT CCGGCGAGGC CGGCAACGGC CGGGACGCAT ATTCCTGGTT CGCCGTATAC
GCGCCTTACG ACAACCCGAA GTATGTGGTT ACCTGCGTCA TCGAGGACGG CGGCTTCGGC
GTGGATGCAG GCGTGCCTGT GGCTTTGGAG GTCATGGACG CCTGCCTGAA GTTCGGCGAC
GGAGAACTGA CCGACGACGT GCCGGTGATT CCCGAAGTGA CCTCGTGGCA TGCATACGTT
CCGACGAACA GCGGCGAGCG TGGTGAGTAA
 
Protein sequence
MLIAALIALA IAIVIVVTVL VVRSMRGRGS VSVRDDVSSI GSATPLDMGG GSSTKTNNAS 
GTSTGHSPYD RIRPRFMAMY VLIAAIFGSL GTKLWSMQVL NSEKYLSDSQ DNLLTTIKTP
ASRGRIFDTE GIELVRNQIN ATILADADVA SQHDVIVRLS ALLGLPYNVI RQRIQDSTNG
AQAQRVVTSS PRERDVAYIA EHPDAFNGIS IEDRPHRVYP YEALACQLLG YAGTVSQEEL
DNAPEGSDYQ SGDEVGKSGI EATYESLLSG THGERVVVAD VDGTVHEVKS ETRPTQGNDV
YLTISARVQA VAEQAMAKLI APYGTIGDGI GTAGAVVGMD LSNGDVVCLA NFPNFNPANF
IGGISQDDWD RYNDDDGYRP LMNRAIAGTY PAASTFKSFT GAAAIHYGFV TEGSGWNCTG
EWTGFGDDYA QKCWDTDGHG YLNFREGIVY SCDVVFYDIA AQFYYARNEI GDAAMQEYVK
LFGFSQATGI PLSGEATGVV PTPEWKKEYY SNQPEEAQWV PGDMTNTAIG QGNVLITPIQ
LAVAYGGIAT GKLFTPNLLK EVRNSEGEIV LEGERSSRDL DTSLIDDKVM DTIRDALRGV
ALEDGDIPKM IEEYGYQAAC KTGSGEAGNG RDAYSWFAVY APYDNPKYVV TCVIEDGGFG
VDAGVPVALE VMDACLKFGD GELTDDVPVI PEVTSWHAYV PTNSGERGE