Gene Shel_13860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13860 
Symbol 
ID8395276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1584977 
End bp1586032 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content61% 
IMG OID644986140 
Productprotoporphyrin IX magnesium-chelatase 
Protein accessionYP_003143756 
Protein GI257064084 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTCATA CGTATGGGGG ACATGCCATG CCAGCAAGTA CGCAGAGGAA CTACCCGTTC 
AGCGCCATCG TTGGACAAGA GGACATGAAG CTTGCCCTCA GCCTTATTTC GGTACAGCCG
GCCATCGGCG GCGTGCTCAT CTACGGAGAA CGCGGCACGG CCAAAACAAC TGCCGTGCGC
GCCTTGCCTG CGTTGCTCGG GGGCGAGACC CGCGTGATCG AGCTTCCATT GAACGCTTCG
GAGGACCGCG TGGTAGGTAC GCTTCAGTTG GGTACCCTTA TGAAGAGCGG CGAGCGCGAA
TTTGTGCCAG GTCTTATGGC CGAAGCGAAC GGGCACATTC TGTATGTGGA CGAGATCAAC
CTGCTGGAAG ATTCGATCGT CGACTTGCTG CTGGACGCCG CCGCAACCGG CGTGTGCCGA
GTTGAGCGCG AAGGCATGTC GCTGCGCTAT CCGGCAAAAT TCGTGCTCAT CGGCACCATG
AACCCTGAGG AAGGCACCCT GCGTCCGCAG CTGCTTGACC GATTCGGGCT GTCCGTCAAG
GTAAGCGGCA GCCTGAACAA GGAGGAACGC CTCACCCTTA TTCGTCGCCA TACCGCCTTT
GAGAACGACC CGGAAGCTTT CGTGCGTGAA TGGCAGGAGC AGGAGAACCT GCTGGCACAG
CGCATCCAGA AAGCCGCGAA GCTGTATGCC GATGTGTTTG TCCCCGACGA CATCATCGAG
TTCGCGACGG GCCTGTGCGT CGAGTTCGAA GTGGACGGCT ACCGCGGCGA TATCACGATG
ATGCGCACCG CGCGTGCAGC GGCGGCCCTT GAAGGCCGAA CCGAGGTGAC CGAAGAAGAC
GTGCTTCTGG CTGCTAGGTT CGTTCTGCCG CATCGTCTGA AGAAGCTTCC CTTCGAGGAC
ATGGGCATGA CCGACAAGAT GCTCGAAAAG GCCGCCACCG CGTTGCACAA GGAGCCCGAG
CCTGAGCAGG TTGCCGTTGC AGGCCCCGTG GCCCTTGTGG TCGAGGCCGA CGAACCTGCC
GACGATGGGG GAGCGGACGT CGCAAAAAAA GGGTAG
 
Protein sequence
MTHTYGGHAM PASTQRNYPF SAIVGQEDMK LALSLISVQP AIGGVLIYGE RGTAKTTAVR 
ALPALLGGET RVIELPLNAS EDRVVGTLQL GTLMKSGERE FVPGLMAEAN GHILYVDEIN
LLEDSIVDLL LDAAATGVCR VEREGMSLRY PAKFVLIGTM NPEEGTLRPQ LLDRFGLSVK
VSGSLNKEER LTLIRRHTAF ENDPEAFVRE WQEQENLLAQ RIQKAAKLYA DVFVPDDIIE
FATGLCVEFE VDGYRGDITM MRTARAAAAL EGRTEVTEED VLLAARFVLP HRLKKLPFED
MGMTDKMLEK AATALHKEPE PEQVAVAGPV ALVVEADEPA DDGGADVAKK G