Gene Shel_13650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13650 
Symbol 
ID8395256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1564416 
End bp1565183 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content59% 
IMG OID644986120 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
Protein accessionYP_003143737 
Protein GI257064065 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCAGC CTGAATCCGT TTTGACGGCG GATAGACTCA CCCTTGCCTG GGAGGACGTC 
GTGGTGACTG AGGAAGTTTC ACTGCACGTG CTTCCAGGGG AGGTGTGCTG CCTTGTCGGC
AAGTCCGGCT GCGGAAAAAC AACCATTCTG CATGCTTTGG CGGGCTTGAC GAAGCCTGTT
TCGGGACGGG TGCTGGTGCA TGGCTGTGAC GTCACGGGAA AGCCGGGGCG CGTGAGCTAC
ATGCTGCAAA AAGACCTTCT GCTTGAACAG CGGCGCGTCA TAGACAACGT CGCCTTGCCT
TTGGTTCTTA AAGGGGTTTC GAAACGAGAG GCGCGGGCTG CTGCCGAGCC GTTGTTCGAG
CGGTTCGGGC TGGCGGGAAC CCAGATGAAG TGGCCTCATC AGCTTTCGGG CGGCATGCGG
CAGAGGGCGG CGCTTCTGCG AACCCATCTT ATGGGCAACG ACTGCATCCT TTTGGACGAA
CCGTTCAGCG CGCTTGACGC CATGACGCGT ATGGACATGC GCGAATGGTT CTTAGGGATA
GTGAAGGACT TGGGTCTTTC GGCTTTAATC ATCACCCACG ATGTGGATGA GGCCGTATGC
CTTTCAAGCC GCGTGTACGT GCTTTCAGGA AGCCCTTCCC ATGGGACCCC GTCACGCATC
GCCGACGAAA TAACCATCGA CCGCGGCGAC CTGCCCCTCG ACGAGTTCGA GCTGACCTAT
GCCTACGCCG ACGCCAAACG CCGTATCCTC GATGCCATCC GCCACTAA
 
Protein sequence
MIQPESVLTA DRLTLAWEDV VVTEEVSLHV LPGEVCCLVG KSGCGKTTIL HALAGLTKPV 
SGRVLVHGCD VTGKPGRVSY MLQKDLLLEQ RRVIDNVALP LVLKGVSKRE ARAAAEPLFE
RFGLAGTQMK WPHQLSGGMR QRAALLRTHL MGNDCILLDE PFSALDAMTR MDMREWFLGI
VKDLGLSALI ITHDVDEAVC LSSRVYVLSG SPSHGTPSRI ADEITIDRGD LPLDEFELTY
AYADAKRRIL DAIRH